Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03095 ATGGAGAAGAAAGAGGGTGAAGCCCCCGTGTTGTGGTTCGAAACCTCCGACTCTGTTTGTCGTCGACACCAGTTTGAACCCGATGGTCGACTCTCCGTAGTGGTTGTTGACGATTCCAGGCCCTTCTACCAAAGGATAGCTGGATCTTTCATGAATAAATTTTTTCCCTCGGGATATCCCTACAGTGTGAATGAAGGCTATCTTAGATACACACAGTTTCGAGCCCTGCAACATGTTACCAGTGCAACGCTATCGGTGCTATCAACTCAGTCCTTACTATTTGCTGCAGGGTTGCAGCCTACTCCTGCACAAGCGACAGCAGTTAGTTGGATTTTGAAGGATGGAATGCAACATGTCGGGAAGCTAATCTGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTGCTAGCTGATGTGCTCTATGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCGCATCTTTTTCTTGAAATGGCAGGCTTAGGAAACTTTGCGAAGGGGATGGCGGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTATTGGAATTGGAGTTGGAATTCAATTAGCATCTTCTATATGTGCATCAATGCAGGGAAAGTTGGTTGCGGTTCCTCTCCTTACAATTATACATATATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTGAATCCACGAAGAACTGCAATGGTTGTGGATGATTTTCTCAAGGCAGGAATTGTTTCAAGCCCTGCTAGTCTAAGATATAGGGAAAATCTGCTCTTTAATCTGCAACTCAAAGAAGATACTGGAAATGTAAGAGTTGGGAATGCTATGCACAAGGCCATTAAGCCTTCAAGGCTTCTTGAATTAAAACAAGTGTTCTCTGAGGAGAAGTTTCTTTTAAACTTCGGTCATAAATGCATTGACATGGTATTGGAGCAAGATGCTACTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAGTTGAGAGTTCCTCTCTTCATGAGCTCAGTGCTAGTGTCATGCATGAGGCTTATGAGAAAATGAATGCTGTCTTTCCTGTTTTCTTGAAAGAATTGCAGAACAAAGGGTGGCATACTGATCGATTTTTGGATGGAACTGGGAGCCGTTTTGCATTATAG 1254 0.4322 MEKKEGEAPVLWFETSDSVCRRHQFEPDGRLSVVVVDDSRPFYQRIAGSFMNKFFPSGYPYSVNEGYLRYTQFRALQHVTSATLSVLSTQSLLFAAGLQPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASSICASMQGKLVAVPLLTIIHIYSVSEEMRATPINTLNPRRTAMVVDDFLKAGIVSSPASLRYRENLLFNLQLKEDTGNVRVGNAMHKAIKPSRLLELKQVFSEEKFLLNFGHKCIDMVLEQDATGEDALRGWLVAAYAAQVESSSLHELSASVMHEAYEKMNAVFPVFLKELQNKGWHTDRFLDGTGSRFAL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03095 417 Pfam Vitamin B6 photo-protection and homoeostasis 45 276 IPR006968 -
Spst1g03095 417 PANTHER RUS1 FAMILY PROTEIN C16ORF58 11 416 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03095 Spst-Chr1 39495844 39499333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03095 - - gmx:100804154 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03095 1 39495844 39499333 Spst1g03095 1 39495844 39499333 ECH
Spst1g03095 1 39495844 39499333 Spst7g00630 7 6226395 6230055 PCT