Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03093 ATGAAATCCTGCATAAGCCTAAAGCTAAGGCTTTCACCTGCTAAAAAGGCATGGAAGAGCTTCACTTCTACTATTGGTAAACTCCGTAAGTCAAAATCGAAAGCCATGAAGAAACCAAGAAAGCAGTCGAAACCTACCTCCAAGGCCCCTCCTAAGTTCATTGTGACCAAACGTTTTCGCCACAAAAGGTTTGCCACAGTCAAAAGTTTGATCTTGGGGTTCCACAAGAAGCCTGCACCTGTGTACATTGATAAGCTCTTTAGAGAGTCTTCATGTGACTTGGTGGGGCAGTTGAAGCCACAGACAGCACACAAACCACGAAGGGAAAGGCTCTCTGGGGAAGAAGGAAGAAGAAAGGGTGGTAGATCTTGTGCCTCAGATGATATGTGGGAGTCACTGGCGTTGGCCTCACCTCAGATGCAGGGAATAGATGAACGAGCAGAGGAGTTCATCAATAGATTCAGACAAGAGATGGCGGCGCAAGAGATCATAGCAAGAAATATGTAG 507 0.4615 MKSCISLKLRLSPAKKAWKSFTSTIGKLRKSKSKAMKKPRKQSKPTSKAPPKFIVTKRFRHKRFATVKSLILGFHKKPAPVYIDKLFRESSCDLVGQLKPQTAHKPRRERLSGEEGRRKGGRSCASDDMWESLALASPQMQGIDERAEEFINRFRQEMAAQEIIARNM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03093 168 MobiDBLite consensus disorder prediction 30 45 - -
Spst1g03093 168 MobiDBLite consensus disorder prediction 102 125 - -
Spst1g03093 168 MobiDBLite consensus disorder prediction 97 125 - -
Spst1g03093 168 Pfam Cotton fibre expressed protein 142 161 IPR008480 -
Spst1g03093 168 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03093 Spst-Chr1 39477828 39478334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03093 - - gmx:100500419 238.039