Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03091 ATGGAGCGGTTGAAGCTGGCGCAACTGGGAGAGAGGCTGAAGACGGGTGGGGCCCAGATGGGCCGAATGGTCAGCGGCAAGGTCAAGGAGATGCTCCAGGCCCCCACGCCCGAATCCAAGATGGTTGACGAGGCCACGCTTGAAACCATGGAGGACCCTAATTGGGGCATCAATCTCAGGATATGTGCCATGATCAACAGCGACCAATTCAACGGCTCCGAGGTCGTTAAGGCCATCAAGAGGAAGATCAACCACAAGAGCCCTGTGGTTCAGACTCTTAGCCTCGACCTCTTGGAAACCTGCGCCATGAACTGCGACAAGGTCTTCTCCGAAATCGCTTCCGAGAAGCTTCTTGACGACCTGCTTCGCTTGATTGATGATGCCCAGGCCCACCACCACACTCGACGTCGGGCTTTCCAGTTGATTCGGGCCTGGGGCGAGTCCGAGGATCTTGCCTATCTTCCCGTCTTTCGCCAAACTTATATGAGTTTGAAAGGAAGGGATGATCCTCTTGACATGGCGGGAGGAAATTCACCACCTGTTCCGTATGCCTCTGAGTCATATGCCCATCAATATCCTGTAGACCCCCCTGAAAGATACCCAATTCCTGAAGCTGAATTAGGTATGGATGATCCAGTGGCTTTCTCTTCTAATTACCAACACATATCAGTGGAGGAGAAGAAAGAGCATCTTGTGGTTGCTCGGAACAGTCTGGAATTGCTCTCTAGCATATTGAATTCTGAGGCTGAGCCAAAACCTTTGAAGGAAGATTTAACTGTGAGCTTGTTGGGCAAGTGCAAGCAATCGCTGTCTATCATCAAGGGGATTGTGGAAAGCACTACAGATGATGAAGCAACGCTTTTTGAGGCTTTATATCTCAATGATGAGCTTCAGCAGGTAGTTTCTAACTACGAGGAATTAGAAGCTGCTCAAATGTCTGGGACGCAACAACCTCAAAATGCTGACCCCGCCAAGCATGATGCGGAAGCTGTTCAAAATCCCAATGAAGTAACTGCAAGGTTTGAAATTGATGATTCGGAAGAATCTGAACCTGATCAGAATCTGGATCGAAAGGTGCCCCAAAAGTCTAACACTCTTGAAGTCAATGCAACTGAGGGCGAGAGGAATGGTCTTACTGAAACTAAAATAGTGAATGGCACAAAGGACAAGAATGATGAATCTAGCTTCAAGGGAGATACCGAATGA 1206 0.4884 MERLKLAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKSPVVQTLSLDLLETCAMNCDKVFSEIASEKLLDDLLRLIDDAQAHHHTRRRAFQLIRAWGESEDLAYLPVFRQTYMSLKGRDDPLDMAGGNSPPVPYASESYAHQYPVDPPERYPIPEAELGMDDPVAFSSNYQHISVEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEELEAAQMSGTQQPQNADPAKHDAEAVQNPNEVTARFEIDDSEESEPDQNLDRKVPQKSNTLEVNATEGERNGLTETKIVNGTKDKNDESSFKGDTE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03091 401 PANTHER TOM1-LIKE PROTEIN 1 5 369 IPR044836 GO:0035091|GO:0043130|GO:0043328
Spst1g03091 401 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Spst1g03091 401 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Spst1g03091 401 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Spst1g03091 401 SUPERFAMILY GAT-like domain 187 308 - -
Spst1g03091 401 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Spst1g03091 401 MobiDBLite consensus disorder prediction 310 401 - -
Spst1g03091 401 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Spst1g03091 401 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Spst1g03091 401 CDD VHS 39 165 - -
Spst1g03091 401 Gene3D - 217 311 IPR038425 -
Spst1g03091 401 MobiDBLite consensus disorder prediction 385 401 - -
Spst1g03091 401 Gene3D - 28 182 IPR008942 -
Spst1g03091 401 MobiDBLite consensus disorder prediction 358 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03091 Spst-Chr1 39461910 39463688 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03091 - - gmx:100803803 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03091 1 39461910 39463688 Spst1g03091 1 39461910 39463688 ECH