LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g03088	ATGTTCTTTTCTTGTGATCTGGGAGAACAAATAGTCCTTCCTCATAAGCTCGTCGCGATGGGTTCTCTACCTGTGCCCGCATTCCCAGGCGCGGCGGCCAAACAATGCCTTAACGAGAGCAGCCGCATTGACGAGAGAGCCCTTACGACGCTGTTCAAGTCGCAACAGAGCCACCTCAACTTCTTCTTCAACCACATCGACCACTCCCAAACCCTAGCCTTCACGCGCGCCCTCCTCGACGCCTCCGGCACCGTCTTCTTCACCGGCGTCGGCAAGTCCGGCTTCGTCGCGCACAAGATCTCGCAGACGCTCGTCTCACTCGGAATCCGCTCCGCCTTCTTGTCCCCGGTCGACGCGCTCCACGGCGACATCGGGATCCTCACCGAACGCGACGTGCTCGTCCTCCTCAGCAAGTCCGGCGCCACCGACGAGCTCCTCCGCCTGGTGCCTTGCGCGAGGGCGAAGGGCGCCCTCCTCATCGCGCTCACCTCCGTCGAAGGCAACGCGCTCGCCGCGATGTGCGACATGGCCGTGCATTTGCCCCTCCAGAGAGAGCTCTGTCCCTTCAATCTCGCGCCGGTCACATCCACCGCCATTCAGATGGTTTTCGGCGACACCGTTGCCATCGCGCTAATGGAGGCGAGGAATCTCACCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATTGGGAAGAGTCTCATCTTCAAGGTGAAGGATGTGATGAGGAAACAGGACGAGCTTCCAATTTGCAGAGAATCGGATTTGATTATGGATCAGCTTGTGGAGCTCACGAGTAAAGGATGCGGATGCCTCCTTGTTATCGATGACGATTACCGTCTGATCGGAACGTTCACCGACGGTGATCTCCGTCGCACTCTCCGAGCGAGTGGAGAAGCCATTTTCAATCTCACTGTGGGGAAAATGTGCAACAGGAATCCAAGAATTATTGGTCCGGAGGCTATGGCAGTGGAGGCGATGAAGAAAATGGAGGCACCTCCATCGCCTGTTCAGTTTTTGCCCGTGATAAACGATGAGAATATTTTGATTGGGATTGTGACCTTGCATGAATTGGTTTCAGCTGGCTTGTGA	1095	0.5671	MFFSCDLGEQIVLPHKLVAMGSLPVPAFPGAAAKQCLNESSRIDERALTTLFKSQQSHLNFFFNHIDHSQTLAFTRALLDASGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTERDVLVLLSKSGATDELLRLVPCARAKGALLIALTSVEGNALAAMCDMAVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMRKQDELPICRESDLIMDQLVELTSKGCGCLLVIDDDYRLIGTFTDGDLRRTLRASGEAIFNLTVGKMCNRNPRIIGPEAMAVEAMKKMEAPPSPVQFLPVINDENILIGIVTLHELVSAGL	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g03088	364	ProSiteProfiles	CBS domain profile.	311	364	IPR000644	-
	Spst1g03088	364	CDD	SIS_Kpsf	83	210	IPR035474	-
	Spst1g03088	364	SUPERFAMILY	SIS domain	53	363	IPR046348	GO:0097367\|GO:1901135
	Spst1g03088	364	ProSiteProfiles	CBS domain profile.	243	302	IPR000644	-
	Spst1g03088	364	Gene3D	-	234	362	IPR046342	-
	Spst1g03088	364	ProSiteProfiles	SIS domain profile.	74	217	IPR001347	GO:0097367\|GO:1901135
	Spst1g03088	364	PANTHER	-	37	364	-	-
	Spst1g03088	364	NCBIfam	KpsF/GutQ family sugar-phosphate isomerase	83	354	IPR004800	GO:0005975\|GO:0016853
	Spst1g03088	364	Pfam	CBS domain	239	295	IPR000644	-
	Spst1g03088	364	Pfam	CBS domain	307	362	IPR000644	-
	Spst1g03088	364	Pfam	SIS domain	82	209	IPR001347	GO:0097367\|GO:1901135
	Spst1g03088	364	CDD	CBS_pair_SIS_assoc	235	360	-	-
	Spst1g03088	364	Gene3D	-	43	233	-	-
	Spst1g03088	364	PIRSF	KdsD_KpsF	33	364	IPR004800	GO:0005975\|GO:0016853

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g03088	Spst-Chr1	39428495	39429764	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g03088	K06041		-	gmx:100805755	608.216

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g03088	1	39428495	39429764	Spst1g03088	1	39428495	39429764	ECH