Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03083 ATGACAAGAGGAAGAGCAGATGTGAACTCAAGAAAAAAATTGGTCATAACTGTTGTGGTTTTGGTGATTCTTGGTGCTTTCTTTTACTTTTATTCTCAGAGTAATGATTCATCGATTGTTGAGTATGGTGATAAATCTTTGAAACACTTTGGTTTGAGAGGGGACAAAGATGAGGGTGAATCTTCCTCCACACTTGTTGGAGGAGAGGACAGTGCTATACCAAAAAGCATTCCAGTCTGTGATGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACCTCATATACCAAACAAGATTGAAGCTTGATTTATCTGTGATGGAGCATTATGAAAGACACTGCCCAATACCTGAGAGGCGATATAATTGTTTAATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTGTGGAAGGCAAATATACCTCATACCCATCTTGCAACTGAAAAATCTGACCAGAATTGGATGGTTGTGAAAGGTGAAAAAATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCAGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATAATATAAACAATGAGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGAGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCAGATGTGATAGCAATGTCACTGGCTCCAAATGATGTTCATCAAAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTAAGGCTCCCTTACCCGAGTAGATCTTTTGAATTGGCTCATTGTTCTCGCTGTAGAATTGATTGGCTCCAAAGAGATGGTATACTTCTCCTTGAGCTGGATAGGTTGCTCAGGGCAGGAGGTTATTTTGCATACTCATCTCCTGAAGCCTATGCACAGGATGAGGAGGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGAATGTGCTGGAAAATAGCTGCTAAGAGGAATCAGACTGTTATTTGGGTCAAGCCTCTCACAAACAGTTGCTACTTAAAGAGATTGCCTGGTACTCTACCCCCACTCTGCAGATCTGATGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGCATTTCACGTTATTCTGATCAAATGCACAAGGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCAATATTCTACAAAAATGTTTGAGAAGGACATGGAAGTTTGGCAACAACGAGTTCATAATTACTGGAGCAAGCTAGGCAGTAAGATTAAAGCAGACACAATTCGGAATGTGATGGATATGAAGGCAAATATAGGTTCATTTGGTGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGAACCAAAATCTCTCGCCATAATATATGACAGAGGATTGATAGGAGCAGTTCACAACTGGTGTGAAGCTTTTTCGACCTACCCGCGAACGTATGATCTACTCCATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGATTTGTTAATTGAGATGGATAGAATCCTGAGGCCGAAGGGTTTCATCATTGTCCATGATAAGCGTTCAGTGGTGGAGTATGTAAAGAAATACGTGCCAGCATTACACTGGGAAGTTGTGACCATATATGACGTAGATCAAGGTAAAGATAATGATGATGATGATCATGCAGTGGTTATAATTCAAAAGAAGATATGGCTCACAAGTGATAGCATTCAGGTTTCAGAATAG 1836 0.409 MTRGRADVNSRKKLVITVVVLVILGAFFYFYSQSNDSSIVEYGDKSLKHFGLRGDKDEGESSSTLVGGEDSAIPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSVMEHYERHCPIPERRYNCLIPPPPGYKIPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRAGGYFAYSSPEAYAQDEEDRRIWREMSALVERMCWKIAAKRNQTVIWVKPLTNSCYLKRLPGTLPPLCRSDDDPDAVSGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIQYSTKMFEKDMEVWQQRVHNYWSKLGSKIKADTIRNVMDMKANIGSFGAALKDKDVWVMNVVPENEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVHDKRSVVEYVKKYVPALHWEVVTIYDVDQGKDNDDDDHAVVIIQKKIWLTSDSIQVSE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03083 611 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 18 601 IPR004159 GO:0008168
Spst1g03083 611 Gene3D Vaccinia Virus protein VP39 203 348 IPR029063 -
Spst1g03083 611 FunFam probable methyltransferase PMT3 184 351 - -
Spst1g03083 611 FunFam Probable methyltransferase PMT19 419 582 - -
Spst1g03083 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 348 IPR029063 -
Spst1g03083 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 416 575 IPR029063 -
Spst1g03083 611 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 584 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03083 Spst-Chr1 39384273 39389591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03083 - - gmx:100805403 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03083 1 39384273 39389591 Spst1g03083 1 39384273 39389591 ECH
Spst1g03083 1 39384273 39389591 Spst7g00082 7 648770 652577 PCT
Spst7g00644 7 6461440 6465139 Spst1g03083 1 39384273 39389591 PCT