Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03082 ATGAGGTACTCCTACAGTAACATCTATGCATCTTTTGTTAGGGTGAATACAGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTCCAAGCTTTCCGCTCTGATGCTAAAGATTCAGCTATTATTGAGAGCAAGGAGCTCCAATATGATAAAAATAATGGAATTCATGTCTTGGAAATTTTCCCAGATAATGTGGATGTGGGAACTTATGTGTTTGTTTTTGAGATTGTACTTCACGATTCTGCTGGTGAGAAAGTTTATGCTACTGGAGGTCAAATTCATGTACCAATATATGTCACTGGCATTATCAACGTCAGGAATGCAGAAATTGCAGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAAAGATAGATTTGGCTGGAAATGTTGTTGTTGAACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTATCTTTCGAATTGACAACACCTAATGGTCATGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTAAAGCATGAGACAAAGCATGAACACATCTTTGTGGTTGGAAATACTGGCAAGAACTGGACTGGGATTGAAAAGCTTGATTTTCTTGGTTTAGTGGAGAAATTTTATTATCTCTCGGGCAGATATGACATTGAGCTGACAGTTGGAGATGCTGTCATGGAGAACTCTTTCTTGCTGCCGCTTGGTCATGTTGATTTAGATCTTCCAGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTTGATCCTTACTCAAGATATGGTCCCAAAGCTGAGATAGCCCACATATTCAGGACGCCTGAAAAACGACCACCCCAGAACCTCTCTCTTACTTTCTTGAGTTTGACTCTTCTGCCATTTATTGGCTTTTTAGTTGGGTTGTTACGCTTGGGGGTGAACTTGAAAAATTTTCCGTCTTCAGCAGTACCTGCTACATATGCCATCCTATTTCAGCTTGGCATTGCTGCAGTCCTACTGCTCTATGTACTTTTCTGGTTGAAGTTGGACTTGTTCACTACACTCAAAGCCGTAGGATTTTTGGGAGTTTTTCTGATGTTCGTGGGACACAGAATTCTATCCTATCTCGCTTCAACTTCATCCAAGTTGAAGTCTGCATGA 1128 0.414 MRYSYSNIYASFVRVNTVLGSAAPPLTVKLVQAFRSDAKDSAIIESKELQYDKNNGIHVLEIFPDNVDVGTYVFVFEIVLHDSAGEKVYATGGQIHVPIYVTGIINVRNAEIAVLDSDLGSVETQKKIDLAGNVVVELSANHLQKLRLSFELTTPNGHAFKPHQAFFKLKHETKHEHIFVVGNTGKNWTGIEKLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLLPLGHVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHIFRTPEKRPPQNLSLTFLSLTLLPFIGFLVGLLRLGVNLKNFPSSAVPATYAILFQLGIAAVLLLYVLFWLKLDLFTTLKAVGFLGVFLMFVGHRILSYLASTSSKLKSA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03082 375 PANTHER RIBOPHORIN II 13 374 IPR008814 GO:0006487|GO:0008250|GO:0016020
Spst1g03082 375 Pfam Oligosaccharyltransferase subunit Ribophorin II 13 367 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03082 Spst-Chr1 39378594 39382305 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03082 K12667 - gmx:100806815 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03082 1 39378594 39382305 Spst1g03082 1 39378594 39382305 ECH
Spst1g03082 1 39378594 39382305 Spst7g00645 7 6466436 6473120 PCT