Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03079 ATGAACATCTTCTCCAAGAAACCCACTGCCAAAGAGGCTCTTCGTGAGAGTAAACGACAAATGACAAACGCCACTAGAGGTGTAGAGAAGGAAATTGGAGCACTACAATTGGAAGAAAAGAAGCTTGTTGCTGAGATAAAGAGAACTGCTAAGACAGGGAATGAGGCAGCAACTAAAATTCTAGCACGCCAGTTGGTCAGGCTTAGGCAACAAATTGCTAATCTTCAAGGTAGTAGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCGATGCATGCCCATTCTTCTGTTGCTGTTGGTATGAAAGGTGCTACAAAGGCAATGGCAGCTATCAATAAGGAAATGGCACCCGCAAAGCAGGCTAAAATTATACAGGACTTCCAGAAACAATCAGCACAGATGGATATGACTACTGAAATGATGTCAGATGCTATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAGACTGATGAACTGACAAACCAGGTACTGGATGAAATTGGTGTTGATGTTGCCTCTCAGTTATCAGCAGCTCCAAAAGGGAGAGTTACGACAAAGAATACTGAAGATGTCAGCAGCTCGGGCATTGACGAACTTGAGAAGCGTTTGGCAGCTCTTAGAAATCCATAA 639 0.4382 MNIFSKKPTAKEALRESKRQMTNATRGVEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAINKEMAPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETDELTNQVLDEIGVDVASQLSAAPKGRVTTKNTEDVSSSGIDELEKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03079 212 MobiDBLite consensus disorder prediction 177 199 - -
Spst1g03079 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
Spst1g03079 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Spst1g03079 212 Gene3D - 4 181 - -
Spst1g03079 212 MobiDBLite consensus disorder prediction 9 24 - -
Spst1g03079 212 MobiDBLite consensus disorder prediction 181 195 - -
Spst1g03079 212 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03079 Spst-Chr1 39331139 39339921 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03079 K12192 - gmx:100306343 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03079 1 39331139 39339921 Spst1g03079 1 39331139 39339921 ECH