Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03076 ATGGCGAGCCCAGGTTTATACCGCAGACCGCTCCCTTCCCCTGCAATCGAGTTCTCTTCGTCCGGAGGCAAGAAGCTGTTCTGGGAAGCTCTTCAGCATGGAACCATGGAAGGCTTCTTCAAGCTAATATCGTACTACCAGACACAATCAGAGCCTGCATATTGCGGTCTCGCCTCTCTTTCCGTTGTCCTCAATGCCCTTGCTATTGACCCTGGAAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGAGTCCATGCTGGATTGCTGCGAGCCTTTGGATAAAATTAAACTGGAAGGCATTACGTTCGGGAGAGTTGCGTGTTTGGCTCGATGCAATGGAGCTAAGGTGGAAGCCTTTCGATCGGATCAAAGCTCGGTTGATGAGTTTCGCAACCGTGTGCTTTCGTGCTCTTACACTGAGGATTGTCATGTGATTGTGTCTTACTATAGGAGAACTCTCAATCAGACTGGAAATGGGCATTTTTCACCGCTTGGAGGATATCATACTGGAAGGGATATGGTCCTTGTATTGGATGTTGCTCGTTTCAAGTATCCTCCTCACTGGGTTCCCCTTACCCTTCTCTGGGAGGCAATGAGCACCATAGATCAAGCAACCGGACTTCCAAGGGGGTATATGCTTATTTCAAGGCTTAACAGAGCACCGTCTATACTTTATACTATGAGTTGTAGACATGAAGGTTGGAGCAGTGTAGCCAAATTTCTAACTGAAGATGTCCCTCAACTTCTGAAGTCAGAGGATCTAAAAGACATTCAGGAAGTACTGTCTGTTGTTTTTAAATCGCCTCCTGGTGAATTGAGAGGATTAATAACATGGATTGTTGAAGTTCGCAGACAAGAAGATAGGAATCTCACATTGAGCGACGAGGAGAAAGGACGGCTCGCTATCAAGGCTGACATACTGCAACAGATTCGGACAACTACACTTTTCAAACACGTGACCAGGTGGTTGGATTCTGAAACTTCATGCTGTAAAACTAATGAAAACCTTGGTGACAAAGATACGTTAGCAGCTGTTGCCACCGGTGTTTGTTGCCAAGGAGCAGATCTTTCGACTGGTTTTGGTAAGCTAGGTTTGTCGGGTGGAAAATGCTGTAGTCAAATGGAGGTAAAACATCTGAATGTTGATAGCGAAAATCCAGTAACATTAGTTTCAGCAACTGTTACAACTGGTCGTGGGAGTGAACAAGGAGTTGATGTGTTGGTCCCTTTGTGTCAAAGGGAGCCAAGTAGGTTGTGTGTTTGTAATGAAGGTCACTGCATAGGAATGCATCCATCTACTGCAGATGTCTTAACGGTACTTTTATTGGCCTTGCCCTTGCTTACGTGGTCGGGCATTAAAGAAGAAAAGCTGCGAGTGGAAGTTTTGACCCTTCTAGCAACAGAAGATCTCCCTCCCCTGCTTCGGGAAGAGGTTTTGTTTTTGCGGGACCAACTGCATTTTCTCATGACGGATATTAGAGCCCCTTCCAGTTTTGACTAA 1503 0.4578 MASPGLYRRPLPSPAIEFSSSGGKKLFWEALQHGTMEGFFKLISYYQTQSEPAYCGLASLSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLDKIKLEGITFGRVACLARCNGAKVEAFRSDQSSVDEFRNRVLSCSYTEDCHVIVSYYRRTLNQTGNGHFSPLGGYHTGRDMVLVLDVARFKYPPHWVPLTLLWEAMSTIDQATGLPRGYMLISRLNRAPSILYTMSCRHEGWSSVAKFLTEDVPQLLKSEDLKDIQEVLSVVFKSPPGELRGLITWIVEVRRQEDRNLTLSDEEKGRLAIKADILQQIRTTTLFKHVTRWLDSETSCCKTNENLGDKDTLAAVATGVCCQGADLSTGFGKLGLSGGKCCSQMEVKHLNVDSENPVTLVSATVTTGRGSEQGVDVLVPLCQREPSRLCVCNEGHCIGMHPSTADVLTVLLLALPLLTWSGIKEEKLRVEVLTLLATEDLPPLLREEVLFLRDQLHFLMTDIRAPSSFD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03076 500 Pfam Domain of unknown function (DUF1984) 230 486 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Spst1g03076 500 Gene3D - 15 220 IPR038156 -
Spst1g03076 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 485 IPR040409 GO:0016756|GO:0046872|GO:0046938
Spst1g03076 500 Pfam Phytochelatin synthase 7 212 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Spst1g03076 500 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 14 219 - -
Spst1g03076 500 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 220 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Spst1g03076 500 SUPERFAMILY Cysteine proteinases 11 216 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03076 Spst-Chr1 39316547 39321006 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03076 K05941 K17756 gmx:100782042 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03076 1 39316547 39321006 Spst1g03076 1 39316547 39321006 ECH