Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03075 ATGGAAGGGAGAGAGAATGGTCACCCATTGCTGAGAGGAGGTAGAAGAGAGAAAGATTACAGCCATGGGTTATCCACTTCTCAGATGCATGTCATGGCTTCCATTTGTGACACCCTTTTTCCTTCCCTGCCACTGGACTCACTCAACAACAAAAGTTCACTTGACCAACAACCTCTCTCAGCCTTCTACAATTCCTCTGCTTCCCAAAGCCCTTTTCCTGCTGAGGCTGCAGAGCTGTTGTACAAGAGGTGTATGCCAGAAGCATTGTCTCTGGTGAGTTGGGTTCTGTGGATGCTGTCTTTGAGATTGGGGACACTGTTGATCTGTGGAAGACTTTGCTTGGACTGGAAGTGGCCTTTCATTCACAAGTTCTCTGAGATTTCCTTGGAGAACAGAGAAGAGATTCTCAGACACTGGTCCAGGGAAAAGCGTTGGGTGCCCCTGCGGTTAGTGTTTGTCCTCATCAAACTTGTTTTCTTCTACAATTTCTTCTCAAGGACTGATGCAAACGGGGATAATCCCGCATGGAAAGCAATTGGATACGAGGTGGACACCAAGGAAAAGTTGGCACGAAAGGAGAGGCCTCTACAAAAGGGATTAATAGAGACTATGTATGAAACAGATTCTACTTTAATGCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATAAACAGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTGGGATCTGGTTGTGGTGGTGGAGTTGCAGCTGCAGTTCTTGCAAACACTGGTCAGAAAGTAATCGTCCTAGAGAAAGGGGAGTATTTTGTTTCCAATGATTATTCTTCCCTAGAAGGTCCATCCATGAACGAACTATACGAATCAGGTGGCATTTTCCCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACAGTGGGTGGAGGCTCTGCTATAAACTGGTCTGCATGCATTAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAAAAAATATAAAATTCCGCTTTTTGCAAGCTCTAATTATCAGTCTGCCATGGACTCGGTGTGCAGAAGGATTGGTGTGACAGAGAAGTGCAAGAAAGAAAGCTTTCAGAATCAAATTCTCATTCAAGGATGTGAGAAAATGGGCTTGAAAGTGGAGTCAGTGGCTATAAATTCCTCAGCAGATCATTATTGTGGTTCATGCTGTTATGGTTGTAGGACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGAAATGGTGCAGTGATCCTCTCTGGGTGTAAAGCTGAGAGATTCATACTTGAAGATGGAAATGGTGGAACGAAGAATAAGAAATGCTTAGGAGTGATTGCTGCAGCAACTTGGAGGAGTAGGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAGCTATTTCAGCATGTGGCTCTCTCTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCGAACATCGGAAGGAATCTCCATCTCCACCCTGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGGCGAACTTCAGTGGAAATAACTATGAGGGTGGGATCATAACTTCGATCCACAAGGTATTTGCAGAAGATTCCACCCCAAGATTCATTATAGAAACACCTGCTCTAGGACCAGGATCATTTTCAGCATTAGTTCCCTGGCTTTCAGGGCATGACATGAAAGACAGGATGGCAAAGTATGCAAGAACTGTTAACATTTTTGCATTGATAAGAGACCATGGATCAGGAGAAGTGAAGGCTGAAGGGAGGGTAACTTACAGACTTGACCAAGTGGATAAAGAAAACCTTAGAATTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGAACATACAGGAGTGATGGCCAAAGAATCAAATGTAGGGGGATCAAGGAGGAAGATTTAGAGGAGTTTCTTGACACTGTCACAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTTTGGACAGTGTTTACATCTGCACATCAGATGACAAGCTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCACTTGATGAAAATGGTGAGAGTTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGAAGTGTTTTGCCCAGTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCTACAGCATACTGTATTGCCAGTAAGATTGCAGAATCACTCGGCAAAGACAAACAAATCATGAATAGTTAA 2244 0.443 MEGRENGHPLLRGGRREKDYSHGLSTSQMHVMASICDTLFPSLPLDSLNNKSSLDQQPLSAFYNSSASQSPFPAEAAELLYKRCMPEALSLVSWVLWMLSLRLGTLLICGRLCLDWKWPFIHKFSEISLENREEILRHWSREKRWVPLRLVFVLIKLVFFYNFFSRTDANGDNPAWKAIGYEVDTKEKLARKERPLQKGLIETMYETDSTLMQSLTEKGLEVTEDKQQNLYKVKCDVVIVGSGCGGGVAAAVLANTGQKVIVLEKGEYFVSNDYSSLEGPSMNELYESGGIFPSLDGKMMILAGSTVGGGSAINWSACIRTPDSVLREWSKKYKIPLFASSNYQSAMDSVCRRIGVTEKCKKESFQNQILIQGCEKMGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILSGCKAERFILEDGNGGTKNKKCLGVIAAATWRSRVTKKLLIESKVAISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMANFSGNNYEGGIITSIHKVFAEDSTPRFIIETPALGPGSFSALVPWLSGHDMKDRMAKYARTVNIFALIRDHGSGEVKAEGRVTYRLDQVDKENLRIGLRKALRILVAAGAVEVGTYRSDGQRIKCRGIKEEDLEEFLDTVTIVGGPRSRNELWTVFTSAHQMTSCRMGATEEEGALDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLGKDKQIMNS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03075 747 Gene3D - 219 528 IPR036188 -
Spst1g03075 747 SUPERFAMILY FAD/NAD(P)-binding domain 234 739 IPR036188 -
Spst1g03075 747 Pfam GMC oxidoreductase 236 503 IPR000172 GO:0016614|GO:0050660
Spst1g03075 747 Gene3D - 646 738 IPR036188 -
Spst1g03075 747 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 20 743 - -
Spst1g03075 747 PIRSF Lg_Ch_AO 10 744 IPR012400 GO:0046577
Spst1g03075 747 Pfam GMC oxidoreductase 596 729 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03075 Spst-Chr1 39308384 39311916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03075 4 744 Acyl Lipid Metabolism Gene Families AT4G28570 57.390 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03075 K17756 - gmx:100808951 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03075 1 39308384 39311916 Spst1g03075 1 39308384 39311916 ECH