Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03061 ATGGCCAAGTGTCTGGCACTCTCACTGATCATATCAGGCCTTTTCATTGGCTTGGTAAGTCCAGAATGGAACTTACTGAATCCAAGATGGGGAAAAAGGGTTGAGGAAGTGAGTCCAGAATGGAACATATTGAACCAAAGATTGGAGGAGAATGTGGTTGGAGACAACTTGAAGAGCTACTGTGAAAGTTGGAGGATAAATGTTGAACTAAACAACATTAGGGGGTTCAGTGTTGTGCCTCAAGAATGTGTGGAGCACGTGAAGAAGTACATGACTTCTTCTCAGTACAAAGCTGACTCTGTGAGGGCGGTGGAGGAGATTAGGCTCTACCTCAGTGGGTGCTGCACTTTGAAAGGTGATGGCAAATATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGTTGAATGCAACATCTTTAGAAGCATGGATGAAGGAAAGCAAGGCACCAGCTCTTGATCACACACTGGAGCTCTTCCATGAAATAAAGAACAAAGGGTTCAAAATCTTCCTGGTTTCTTCAAGAAAGGAAATACTTAGATCTGCCACAGTAGACAACCTAGTCAATGTTGGGTACCATGGTTGGACCAGTCTTAAATTGAGGGGTTTTGATGATGAATTGGTTGAAGTAAAAAAATACCATTCAAAGGTGAGACAAGAATTGGTTGATGAAGGTCATCGCATTTGGGGCATCGTGGGAGATCAATGGAGCACTTTTGATGGACTTCCAATGCCAAACAGAACTTTCAAACTACCCAATTCCATTTACTACAAACCATAA 825 0.4194 MAKCLALSLIISGLFIGLVSPEWNLLNPRWGKRVEEVSPEWNILNQRLEENVVGDNLKSYCESWRINVELNNIRGFSVVPQECVEHVKKYMTSSQYKADSVRAVEEIRLYLSGCCTLKGDGKYSWIFDIDETLLSTIPYYKKHGFGGEKLNATSLEAWMKESKAPALDHTLELFHEIKNKGFKIFLVSSRKEILRSATVDNLVNVGYHGWTSLKLRGFDDELVEVKKYHSKVRQELVDEGHRIWGIVGDQWSTFDGLPMPNRTFKLPNSIYYKP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03061 274 FunFam Vegetative storage protein 1 57 274 - -
Spst1g03061 274 SUPERFAMILY HAD-like 116 257 IPR036412 -
Spst1g03061 274 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 51 273 - -
Spst1g03061 274 PIRSF VSP 2 274 IPR014403 -
Spst1g03061 274 NCBIfam plant acid phosphatase 55 272 IPR010028 GO:0003993
Spst1g03061 274 Gene3D - 57 274 IPR023214 -
Spst1g03061 274 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 57 273 IPR005519 -
Spst1g03061 274 CDD HAD_VSP 87 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03061 Spst-Chr1 39187061 39188856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03061 - - gmx:100811100 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03061 1 39187061 39188856 Spst1g03061 1 39187061 39188856 ECH