Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03027 ATGGCGGCAGGTTCAAACTCAAACCTCAGAATCACCATTGAAAGAAACCCTCCCCAGTCACGCCTAGCTGAGTTGAATATCAAGTGCTGGCCCAAGTGGGGTTGCTCTCCGGGGAAGTACCAATTGAAGTTTGATGCAGAAGAGACATGCTACTTGCTGAAGGGGAAGGTGAAGGCATACCCAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGGGACCTTGTCACAATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGTTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTTCTACTTCATCATCATCATCAAATTGTTAA 339 0.4513 MAAGSNSNLRITIERNPPQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSTSSSSSNC 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03027 112 PANTHER OS04G0445200 PROTEIN 7 99 - -
Spst1g03027 112 SUPERFAMILY RmlC-like cupins 17 96 IPR011051 -
Spst1g03027 112 CDD cupin_TM1112-like 30 98 - -
Spst1g03027 112 Gene3D Jelly Rolls 2 98 IPR014710 -
Spst1g03027 112 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03027 Spst-Chr1 38898707 38899346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03027 - - gmx:100793722 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03027 1 38898707 38899346 Spst1g03027 1 38898707 38899346 ECH
Spst1g03027 1 38898707 38899346 Spst7g00688 7 6796574 6797080 PCT