Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03015 ATGAGAGTAATCTTGGTGCTGGCCATGGCAGCAGTGGTTGTGGTTGTTCCAAAGAGAGTAGAAGCATCTCGTGCTTTCTTTGTGTTTGGTGACTCACTAGTTTACAGTGGCAACAACAACTACTTGGCAACAACAGCACGTGCTGACTCTCTCCCTTATGGCATCGACTATCCCACTCATCTCCCCTCTGGACGCTTCTCTAATGGCTTCAACCTCCCTGACCTCATAAGCAAGCGAATTGGGTCTGAACCCACATTGCCTTACATGAGCCCAGAATTATATGGAGAAAGGCTTTTGGTTGGGGCAAACTTTGCTTCTGCTGGGATAGGAATCCTCAATGACACAGGCATCCAATTTGTTGACATCATCAGAATTTCCGAGCAGTTTACATTTTTCGAGCAGTACCAGGATCGGTTAAGTGCAGTTGCGAAGAAGGTTGTGAATAAAGGTCTAGTGCTAATGACACTGGGTGGTAACGACTTTGTTAACAACTATTTCTTAGCTCCCATCACTCTAAGGTCTATGGAATTCACTGTCCCTGACTTCTCTAGCTACCTATATCTGATAATGCAGAGGTTGTACGAGTTAGGGTCTAGAAGGGTGCTGGTGACAGGAACTGGTCCATTAGGGTGTATTCCCTCTCAACTTGCTACAAAGAGCACTAACGGGGAATGTGTCCCTGAGTTGCAACAAGCCATGGAGATTTTCAACCCTCTCCTGGATAACATGATCAAAGATCTCAACTCCCAACTTGGCAATCAAATTTTTATTTCTGTCAATGCCTTCCTAATGAACCTGAACATCATCACCAACCCTGAAAAATATGGTTTTGTTACATCAAAGATAGCATGTTGTGGACAAGGTCCATACAATGGGTTGGGCCTGTATAACCTCTTCTCTAACCTGTGCCAGAACAGGGATGCTTATGCATTTTGGGATGCTTTTCATCCAACCCAACGCGCACTTGAGTTCATTGTGGATGCCATCTTTAAGGGAACAAGTGACCTTATGAACCCTATGAATCTCAGCACCATCATGATCCTGGACTCAAACATCTAA 1059 0.4466 MRVILVLAMAAVVVVVPKRVEASRAFFVFGDSLVYSGNNNYLATTARADSLPYGIDYPTHLPSGRFSNGFNLPDLISKRIGSEPTLPYMSPELYGERLLVGANFASAGIGILNDTGIQFVDIIRISEQFTFFEQYQDRLSAVAKKVVNKGLVLMTLGGNDFVNNYFLAPITLRSMEFTVPDFSSYLYLIMQRLYELGSRRVLVTGTGPLGCIPSQLATKSTNGECVPELQQAMEIFNPLLDNMIKDLNSQLGNQIFISVNAFLMNLNIITNPEKYGFVTSKIACCGQGPYNGLGLYNLFSNLCQNRDAYAFWDAFHPTQRALEFIVDAIFKGTSDLMNPMNLSTIMILDSNI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03015 352 CDD SGNH_plant_lipase_like 25 332 IPR035669 -
Spst1g03015 352 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 24 344 - -
Spst1g03015 352 Pfam GDSL-like Lipase/Acylhydrolase 27 328 IPR001087 GO:0016788
Spst1g03015 352 Gene3D SGNH hydrolase 19 335 IPR036514 -
Spst1g03015 352 SUPERFAMILY SGNH hydrolase 26 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03015 Spst-Chr1 38762339 38768762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03015 25 346 Acyl Lipid Metabolism Gene Families AT4G10950 31.832 5.39e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03015 - - aprc:113860789 522.316