Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02989 ATGAGGAAGTGGCTCAATATGAAGAACAGTGCTGAGAAGTTTCACTCAGACTATGATGCAACAGGTGAAACGCAATTCTTCAATTCTCGTTATCAGTTTCCGATTGCGTTTTCGTTTTCACGTTTCGAGTTGAAACTTGACCGGGAATTTGCTTTCCTCTATGTATGTGGACTCAGCAACTGCGAGGGAAAGAAGAAAGAGTTGTTCGGATCAAGATCATTACGTCGTGAGGGGTGGGTGATGGATGGTGGAAGCGGAAGGGAAGGTTTGGTGCATGGGAAGAAATCAAGTCGTGGGAGTGGCACTGGGGCAATGGAGCTTAGAATGTTCGTGGGGACGTGGAACGTGGGAGGGAAATCACCAAACCAAAGCTTGAATTTGAGGGATTGGCTTACGTGTCCTTCTGCTGCTGACATCTATGTTATTGGGTTCCAAGAAATTGTACCGCTAAATGCGGGGAACGTGCTTGGGCCGGAGGACAGTGGCCCAGCAGCGAAGTGGGTGGGCCTTATACAGGAAGCCTTGAACAATGGTGAAGACAACGATGAAGGAAGCCTCAAGTGTGGGAAAAGTTCCTCAGAATTCCTGTCGTTAGAGGAGGAGTTGGGTAATGGAGAAAGGTCTCCTAAGAGTCCACCAAGCTACTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATCTTCTTGTGCGTGTGGCTACGAACGGATCTTTGCAACCATGTTTCCAATTTGAAAGTGTCCAGTGTTGGCAGAGGCATCATGGGCTATCTTGGAAATAAGGGTTCAACATCAATTAGCATGACCTTGTACAACACCACGTTCTGCTTCGTTTGCACCCATCTGGCTTCTGGGGAGAAGTTTGGTGACGAATTGCGAAGGAATTTGGATGTCTCAGAAATCTTGAAGAAAACTAAATTTTGTCACTCCTGTAAATCTCTTCCTCATCCTCACCCTCCTGAAAACATTCTGGAACACGATAATATTATTTGGCTTGGCGACTTGAATTATCGACTAGCTGCTGGCTACGATGACACACATGAACTACTAAAGAAGAACAATTGGCAGGCATTACTAGATAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTCAGAGGTTGGAATGAAGGGAACATATATTTTGCTCCTACTTACAAATATTTGACCAATTCTGATCACTATGTTGCCCAATCCTCCAAATCCAAGGAAAAACGACGAACTCCTGCTTGGTGTGATCGAATTCTGTGGAAAGGAGAAAAGTTGAATCAGATGTGGTATGTTCGAGGAGAGTCCAAATTCTCAGATCACAGGCCAGTTTATTCACTGTTCTCTGTTGAAGTGGACTTGAAGAGCAAAAATCTAGCTCCCAGGTCGTGCAACTTAAAACCTTTGACAAGTACTGCATTGTCATCAACTTGTTGTGCTGCTAAAGTCCAAGCAGAAGAACAACTCTTGCTGCTAACGAGGGCTCAGAGTTGCATCAACACAAAGAGTGACTCCGAAGTCTTTCCAGAACCAGGCATTTTGGGTACCAAAGAATCCTGGATGTTTGAATCCACTTCAAGTGTTCTTCACATTTGTTTTCATGGAAAACTTCCTGGTGCCTCTGTTTTCCAATACGATAGAGGCAGCAAAGATGCTGCTTCAACAAACACTATCAAATCTACAAGAACAAGTTTCCTCTTCAACAACACTCTGTCAAACCCTGATGCTTACATGGGTGATGATATTTCCATATCAACAAGTTTCACCCAGAACAAAGTTTATGGCAATACAATGATGATGGAAGATGCTTCCCGTAAGACACGTTAA 1815 0.443 MRKWLNMKNSAEKFHSDYDATGETQFFNSRYQFPIAFSFSRFELKLDREFAFLYVCGLSNCEGKKKELFGSRSLRREGWVMDGGSGREGLVHGKKSSRGSGTGAMELRMFVGTWNVGGKSPNQSLNLRDWLTCPSAADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWVGLIQEALNNGEDNDEGSLKCGKSSSEFLSLEEELGNGERSPKSPPSYCLAASKQMVGIFLCVWLRTDLCNHVSNLKVSSVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFCHSCKSLPHPHPPENILEHDNIIWLGDLNYRLAAGYDDTHELLKKNNWQALLDKDQLRIEQRAGRVFRGWNEGNIYFAPTYKYLTNSDHYVAQSSKSKEKRRTPAWCDRILWKGEKLNQMWYVRGESKFSDHRPVYSLFSVEVDLKSKNLAPRSCNLKPLTSTALSSTCCAAKVQAEEQLLLLTRAQSCINTKSDSEVFPEPGILGTKESWMFESTSSVLHICFHGKLPGASVFQYDRGSKDAASTNTIKSTRTSFLFNNTLSNPDAYMGDDISISTSFTQNKVYGNTMMMEDASRKTR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02989 604 Gene3D Endonuclease/exonuclease/phosphatase 93 463 IPR036691 -
Spst1g02989 604 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 1 457 IPR045849 GO:0004445
Spst1g02989 604 Pfam Endonuclease/Exonuclease/phosphatase family 112 437 IPR005135 GO:0003824
Spst1g02989 604 SUPERFAMILY DNase I-like 105 450 IPR036691 -
Spst1g02989 604 SMART i5p_5 105 452 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02989 Spst-Chr1 38436352 38443077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02989 107 448 Acyl Lipid Metabolism Gene Families AT1G65580 30.179 5.09e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02989 - - gmx:100800223 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02989 1 38436352 38443077 Spst7g00741 7 7628870 7632887 PCT