Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02972 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTTTATTCAGTTGCTACTCCTTTTCATCCCTTTGGTGGGGCGGTTGATGTCATTGTTGTTCAGCAGCCAGATGGCACGTTTCGGTGCACGCCGTGGTATGTTCGCTTTGGAAAGTTTCAAGGTGTGCTCAAAGGTGCTGAAAAGGTTGTTCGGATAAACGTCAATGGGGTTGAAGCACACTTCCACATGTATCTTGACAATTCGGGAGAGGCTTATTTTGTAAAAGAGGTGGATGATGAAGGTAGTGATAAAGGAATAAAGTCAAATGGAACTGCTGATAATTCTGAGTTTAGTCAAGAAGATGGTGGTGTTGAAATTGATCAAAAAAATAATACTCATCTGAGCATGGATGATACACTTGGTCATAGACTTGACCATAGCATATCTGATTCAAGGGTTCCTTATCTCGTGGGTGAAGGCCATTCCTCGGTTTTGTCACAACTTCAAAGGGCAGAATCTGATGTTGATAGGAGATTTTATGAATTCTCAGATGATCAATCCTCTTTCGAAGGTTCACTTGATGTTTCAGAATATGAGTCTAGTCGATATGAGAATCTAGATGTGGAGAATATGGACCCACAGGGTTCCCATCCGGAGGTGGTCTTGGTTAGTGTTGATGGTCATGTATTGACGGCTCCTATCTCAGAATCAGAGCAGAATGAGGACAATGTGCAGTTAAAAAATCCTCAATTTCATTTAGGCCCAGGTGAAGGGACTGACTTCTATGAAGATAATGGTGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCCACTGGATGCTTCAACGGATGATGTTTCTGCTAGTAGTTATGACACTAAGGTTGGTGATGATACTTCTGGGCTCCTGTTGGAAACTCAAAGAAAGGAGGAAAAAAATTGTTGGACTAAGGAAACCATAGTGATTAAAAGTCAAGAAGATCATCATTTGCACACTGATTCAGAAGACGTTGTATCTTGTATAAAGACAGAGAGTGTCTTAACAAATTGTTTGGAATTACACCAGTTTGCTCAGCAGGCTGGAAATGCTGATTTACAAAATGTGGGTTCTTCATTGGAGGATCGAAATTCAGCAGAGGAATCTAATGCAAACTGTTCAATTACTGATGAAAACGGACAAGAAAACATTCCGGCTGATTCACAAGGGGTAGGGTCTTTGCTGGAGGGTAGAAATTCAGCAGAGGAATCCAATGCAAATGGTTCAATTACTGATAGTTGTGAACAAGAAAACATCAAACAATGTAGAAAAATTAATGGGTTATATCCCCTTAGTGGACTTTCTTCCTTGGATGACCATAGTTCTCCAGAATTAGAAGTAGAACCTGGAGAGGTTGATAAAGATGCATCAGTAGAAGTTGACACTGGTTCTGGCAGTCATTCTGGTATTAAGGATATTATTGAATGTAATGGTGAACATGTTGGAGAGTCAGTATCAAATGGTCACGTAGTTGATAGTCAACTAAGTTCTGCACTTGAAGATGCCTGTAAGAATAGTGAACTAACTGAACCTCAAACAGCAACTTCCGAAGAGGGGGACCAAAGTCATTCTGCTTTAAGATTTGAGGCCTCACTTTGTGGTCATGAACTTAAGGTGGGTATGGGTTTGGAAGCTGCTGCTAAGGTTTTTGAAGCGCATCGTATATCTGCAGAGGAATTTAGAAGGTCTGCACCATCCATAATTAAGAATGACAATCTAGTTCTGAAGTCCAGAGAGATGTATCTGCGGTGGGAAAAGGCTGCTCCCCTTGTCCTTGGAATGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCTGGTGGGACAGGATGACACAGTGAAGACTACAAATGAAGATCCTGGGTCAGCTTCTCGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAGAGTCAAGACAATTGAGCACACTGATAGTTCATCAAAAGAGGATGTATTTGTAGATTCTGCGTCTGATTGGCAGACTTCTGGTGTCGAACCATCTCCAACATCTACTAGGCATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCCTCAAATGAGATGATCGCGTCCTTAAATCTCAAGGATGGTCAGAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAAAACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTAGTTGGCAGAGATTGGACACAGTCTGGAGTTGCAAGGCTTTTCTCAGCTATTAAATTTTCTGCTTTGGAATATAGTATGGATGCAGATGCATGTGGTGGGTATGACCTGACCTTTTTCTATGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTAACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGCAAGAACTTACCAAATGGACCTGTTGTTATTTCTCCTGACGGATTATTTCCCTCCCTTTACCGAGAAGACTTGTATACTGTTGGCAATAATCACCAAAGTGTGCTAGACAGTAAACAGTATGGTGGGCAAACACATGGAATCTATCGTGATTATGGGACAGATAAAAATCAATATGGGTTTGGAGTTCGGACTGACTTAAGTGGCTACGTATATCTTGGGCTTGGGCTTATGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAGAAGACTTTTCCCTTCTGATTATAATCCGTTCTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATTGGAATCCCGAAGGGCAAGATATTTATCATCAATCCCAAGGGTGAGGTCGCAACAAGTCACCGTATTGATTCAAAATCTTACACATCATTACACACACTGGTTAATGACATGTTCCCTCCCACTTCTATGGTTGAGCAGGAGGACTTCAACTCATGGAATTATTGGAGACTGCCTTTACCAGACGTCGATTAG 3054 0.4149 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQPDGTFRCTPWYVRFGKFQGVLKGAEKVVRINVNGVEAHFHMYLDNSGEAYFVKEVDDEGSDKGIKSNGTADNSEFSQEDGGVEIDQKNNTHLSMDDTLGHRLDHSISDSRVPYLVGEGHSSVLSQLQRAESDVDRRFYEFSDDQSSFEGSLDVSEYESSRYENLDVENMDPQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEGTDFYEDNGELISDENAWTADYVSPLDASTDDVSASSYDTKVGDDTSGLLLETQRKEEKNCWTKETIVIKSQEDHHLHTDSEDVVSCIKTESVLTNCLELHQFAQQAGNADLQNVGSSLEDRNSAEESNANCSITDENGQENIPADSQGVGSLLEGRNSAEESNANGSITDSCEQENIKQCRKINGLYPLSGLSSLDDHSSPELEVEPGEVDKDASVEVDTGSGSHSGIKDIIECNGEHVGESVSNGHVVDSQLSSALEDACKNSELTEPQTATSEEGDQSHSALRFEASLCGHELKVGMGLEAAAKVFEAHRISAEEFRRSAPSIIKNDNLVLKSREMYLRWEKAAPLVLGMTVFGLDLPVDPKDTILVGQDDTVKTTNEDPGSASRRWRLWPIPFRRVKTIEHTDSSSKEDVFVDSASDWQTSGVEPSPTSTRHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGRDWTQSGVARLFSAIKFSALEYSMDADACGGYDLTFFYENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKNLPNGPVVISPDGLFPSLYREDLYTVGNNHQSVLDSKQYGGQTHGIYRDYGTDKNQYGFGVRTDLSGYVYLGLGLMAPHEFKIACLEDIRRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSMVEQEDFNSWNYWRLPLPDVD 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02972 1017 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 539 644 IPR031703 -
Spst1g02972 1017 PANTHER LIPIN 1 858 IPR026058 -
Spst1g02972 1017 MobiDBLite consensus disorder prediction 671 691 - -
Spst1g02972 1017 SUPERFAMILY HAD-like 736 959 IPR036412 -
Spst1g02972 1017 MobiDBLite consensus disorder prediction 366 422 - -
Spst1g02972 1017 Pfam LNS2 (Lipin/Ned1/Smp2) 699 783 IPR013209 -
Spst1g02972 1017 Pfam LNS2 (Lipin/Ned1/Smp2) 806 993 IPR013209 -
Spst1g02972 1017 MobiDBLite consensus disorder prediction 451 470 - -
Spst1g02972 1017 MobiDBLite consensus disorder prediction 445 480 - -
Spst1g02972 1017 SMART lns2 744 973 IPR031315 -
Spst1g02972 1017 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02972 Spst-Chr1 38266521 38272803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02972 K15728 - gmx:100780784 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02972 1 38266521 38272803 Spst7g00759 7 7880067 7887785 PCT