Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02971 ATGGCCATGGCCGAAACGCGAGCGGCATTCTCCCTGCTCCTCCTCCTCTTCCTCCTCTCCCCCTCCGCGGCGGAGATAAAGTCCCTCACCATAAGCTCCGACACCCGCCCCATGATCCTGTTCGAGAAATTTGGCTTCACGCACAAAGGCCACGTGTCCATTGCCGTCTCCTCGGTCTCCGTCGGCGTCCTCTCCTCGGCGGTGCAGCCGGAATCCTCGCGGTTGGGATTCTTCCTCTTGAACGAAGAGTCTCTCCTCCAAGTCCTTATGGAGATCCAACAGAACCCTTCCTTCTGCGTCCTCGACTCCCGCTACATCTTCCTCCTCTTCACATTCCGCGACCTCTCCCCTCCCCCTGTCGCCTCATTCAACGGCTCATACCCGGTCACCAACCCTAACGAGTACAGCCTCTTCTTCGCCAACTGCGCTCCGGAAACCTCCATCACCATGGTTGTCCACACCGAGGCCTACAATCTCGACTCCGACGGTTCCCGCGACTACCTCTCCGCCGGTCAGACCCAGCTCCCTTCCCTCTTCTTCCTCTTCTCAATAGCCTACCTCGCCTTCTTCTCATTCTGGCTCTACCTCTGCTACACCAACAAACGCTCCTTTCACCGCATTCACATCCTCATGGCGCTCTTGCTCCTCATGAAGGCTTTGAATCTAATCTGTGCCGCCGAGGATAAGCATTACGTCAAAGTCACCGGCCTCCCTCACGGCTGGGACGTGTTGTTTTATATATTTCAGTTTATCCGCGTCGTTTTGCTCTTCACCGTCATCGTTTTGATAGGGACGGGATGGTCTTTTCTGAAACCATTTTTGCAGGACAGGGAGAAGAAGGTGTTGATGATTGTGATCCCGCTTCAGGTTCTCGCTAACTTGGCTTCCGTTGTGATTGGTGAAACCGGGCCTTTTATCAAAGACTGGGTTACATGGAATCAGGTGTTTTTGCTTGTGGATATTATCTGCTGTTGTGCTATTATTTTCCCAATTGTTTGGTCTATAAGGTCGCTGAGAGAGACCTCCAAAACCGATGGGAAGGCGTCGAGGAATTTGGCCAAGTTAACGCTTTTCAGGCAGTTTTATATTGTTGTTATTGGGTACTTGTATTTCACGAGGATAGTGGTGTTTGCGTTGAGGACTATTGCGGCTTATAAGTTCCAATGGGTGAGTAATGCTGCGGAGGAAACCGCAAGTCTTGCGTTTTATATTGTGATGTTCTATATGTTTAGACCTGTGGAGAAGAATGAGTACTTTGTGCTTGATGAGGAGGAGGAGGAGGCTGCAGAGCTTGCTCTCAAGGATGAAGAGTTTGAGCTTTGA 1323 0.514 MAMAETRAAFSLLLLLFLLSPSAAEIKSLTISSDTRPMILFEKFGFTHKGHVSIAVSSVSVGVLSSAVQPESSRLGFFLLNEESLLQVLMEIQQNPSFCVLDSRYIFLLFTFRDLSPPPVASFNGSYPVTNPNEYSLFFANCAPETSITMVVHTEAYNLDSDGSRDYLSAGQTQLPSLFFLFSIAYLAFFSFWLYLCYTNKRSFHRIHILMALLLLMKALNLICAAEDKHYVKVTGLPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQDREKKVLMIVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKASRNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKFQWVSNAAEETASLAFYIVMFYMFRPVEKNEYFVLDEEEEEAAELALKDEEFEL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02971 440 Coils Coil 421 440 - -
Spst1g02971 440 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 11 427 IPR009637 GO:0016020
Spst1g02971 440 Pfam Lung seven transmembrane receptor 135 416 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02971 Spst-Chr1 38261841 38263163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02971 K22985 - gmx:100811083 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02971 1 38261841 38263163 Spst1g02971 1 38261841 38263163 ECH
Spst1g02971 1 38261841 38263163 Spst7g00761 7 7909616 7910935 PCT