Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02934 ATGATTTCTGAACCGGCGAGTTCCCTGAGAAAGAGGAACGTCCAAGACCGACGCCTCAGCATCATCGACGTTTCTTCCGCCGACGATTCGCTTCTCGATGGAAATCCTCTCAACCACCACCATTCAGAAACCCAAGCGCACGCGGATTTGCTGTGCACTCCGAACTCGAAGAACTTCGAAGACGCCGCCACCAAACTTCAGCAGTGGGAGCATGAGCCTCACTCCAACGACTCATCCGGAAACGGAAAACCTAAGAAAAATGGCAAATGCAATTTGCGCAAGAGTTTGGCCTGGGATAGTGCCTTTTTCACCAGCGCCGGGGTTTTGGATCCTGAGGAGTTGTCTAGTATAATTGAAGGTGTTGAGAAGGATGAGATGCATGAATTACCGGATATTCAAGAGGATGTGTACAAATCGTGTGAGTCCATATCTACCTTAGCGAGTGATAGCTTGACTTTTGAGAGTGCGGAGGTCGAGGGTGATTTGTTTGAAGATGTAAGAGCTTCAATTCAGAAATCTAGCCGAAAGTCCAGCCCTGCAGGTGCAAACACCAAAGTACCATCATCCCCTGCGGTTCCAGGGTTCCAAAGTCATGACTCTTCAAAAAAGGTTGGTGTGGTTCCTCGAAACAAGATGAAGGCCCCTCCTGCTTCTAAGAATCTAAGTTCTGGCATGCAAAGATTTGGGAACACGATGAAAAAGAATAATCCTATTTTTCCACAACTTCCACAGCCTGCTGCTACAAGGAGAGAGTCGTCTATTTTAAGGCAATCAAAGGTTCTAGCGAAGTCTGGTGTAAGTTCCACAATTTCTTCGAAGAGAGAATCCCTTGGCAATCTCCATGTCAAAGGTGGAAGGGACAAGGCAAAACGAATAGTTGGTGATAGAGTTAGTTCAGTGACAAAAACATCTGTTATTGGAGGTTCTCGGGGTATTGTGCCTAAACCCACACTACCATCGAAATCAGCTTCTGGACTGACAGTATCAACCAGGACTAAATCAGTGACTTCCACATCTTCCGGTAACAATTTGTCTGACAATATTGGTAAATCTTCTTTTAATTACTTAAAAAGAAGTTATAAGCCAACCTCATCTTACCCAGCTGTCAGAACACCTTCAAGAATATCTCCAAGAAATAAAGCTGAACCTGAGATTTCTAGTCTTTCAAGCTTGATGTCTGCCACAAAGCTTTCTTCTAGTATTTCACCTGCCAGTTCTATCAGTGATTGGTCTTCGTCAGAGTCATCCTCAACAATTTCTATGGCTAAACGTGTCTGTAATGGTTCAAGGTCCAGCATTGATAGTGGCTCAAGCAGAAAGGTTTTATTGGACGCTGATGCAGATCAAGGTACACATTCTCACACTCCTCAGAATGATTCAACCTTAGAAAGGCAAGAAGATCAGCATGATGGGTGGTCTATTAGTCAAAAGCAAGGGACAGCTCCTGGAGTGACGGTCCTTCCTCCAGCTCCCAAGAAACCTTCAGGCCTTCGTCTGCCTTCACCAAAGATTGGTTTCTTTGATGGGGTGAAGCCCTTAGTGCGCACTCCACGTGGGGGAATGCCACCACGCTCTGTTGTACCTGGTAGCTTGGCAAAACAGGGAGTTGCAAGTCCAAATGAGGGCCAGAGCAAAACAGAACTTGGAAACCTTCAAGCTTCTAAATCCATCGTGTCAATTGAAAATACAAAACCCAATAACCAGCAAGCTCCACATCCAAATCCTTTTCATGAATCATCAGATGTTGCAATTAAGACATATAACAATGTGCAGAATAAAAGCTCTTCCGACATGCCCATGGGTGCTGATGAAAATACATCACTCATCCATGTAGTGGAGAAAGCCCATCATGATCTGCTACCAATTAAAGGTGTCAATAACCAGGCAAATGTTCATCACGATGATCATGTTGATAGTTTGAGCAAACAAGTTGGACATATGGACATAAATTTTGAGACACAGGATAAGTTTAACATTAATTGCCTTTCTTTATTGCAGACTGATATCAGCTCCCCAGATAAATCCAATTGTCTGAAGTTATCTAATCACGAAAGGATTATTGATTGTCCTAAGGAAGAGGACTTATTGACGAGTTCATCCACTACATTTCTCTGTGTCTCCCCAAACTTTGGTGTGGCAGCTTCAGCAAGGAGACCCTTTGCAGTCAAGAATTCCTTTTGCAACATGGATGGCGTTGTCTTAACAGAATCAGCAGTTTCAGAAACAAAATCGACGACCAACTTGCCAATGCCCGATAGCATTAGTATGAAGGAAAACAACTAA 2283 0.4389 MISEPASSLRKRNVQDRRLSIIDVSSADDSLLDGNPLNHHHSETQAHADLLCTPNSKNFEDAATKLQQWEHEPHSNDSSGNGKPKKNGKCNLRKSLAWDSAFFTSAGVLDPEELSSIIEGVEKDEMHELPDIQEDVYKSCESISTLASDSLTFESAEVEGDLFEDVRASIQKSSRKSSPAGANTKVPSSPAVPGFQSHDSSKKVGVVPRNKMKAPPASKNLSSGMQRFGNTMKKNNPIFPQLPQPAATRRESSILRQSKVLAKSGVSSTISSKRESLGNLHVKGGRDKAKRIVGDRVSSVTKTSVIGGSRGIVPKPTLPSKSASGLTVSTRTKSVTSTSSGNNLSDNIGKSSFNYLKRSYKPTSSYPAVRTPSRISPRNKAEPEISSLSSLMSATKLSSSISPASSISDWSSSESSSTISMAKRVCNGSRSSIDSGSSRKVLLDADADQGTHSHTPQNDSTLERQEDQHDGWSISQKQGTAPGVTVLPPAPKKPSGLRLPSPKIGFFDGVKPLVRTPRGGMPPRSVVPGSLAKQGVASPNEGQSKTELGNLQASKSIVSIENTKPNNQQAPHPNPFHESSDVAIKTYNNVQNKSSSDMPMGADENTSLIHVVEKAHHDLLPIKGVNNQANVHHDDHVDSLSKQVGHMDINFETQDKFNINCLSLLQTDISSPDKSNCLKLSNHERIIDCPKEEDLLTSSSTTFLCVSPNFGVAASARRPFAVKNSFCNMDGVVLTESAVSETKSTTNLPMPDSISMKENN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02934 760 PANTHER OS05G0121800 PROTEIN 16 672 IPR045882 GO:0008017
Spst1g02934 760 MobiDBLite consensus disorder prediction 445 503 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 172 204 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 320 343 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 69 88 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 361 387 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 308 343 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 740 760 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 172 196 - -
Spst1g02934 760 MobiDBLite consensus disorder prediction 515 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02934 Spst-Chr1 37964451 37967874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02934 - - vra:106756818 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02934 1 37964451 37967874 Spst1g02934 1 37964451 37967874 ECH