Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02931 ATGAAGATGGGTTCACTAGAAAGATCAAAGAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTGTGATGGGCTTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCAACCAAAGTTGCTGTTTCAAATAGGACACAGTTTGCTCCACAACCCAGTGAAAAGTCACACCTCACAACAAATGTCAATAAAAGTTGGCTAGCTCCAACTCCAGTGACCACGCCCATGAAGCCTGGAATCCTTGAACATGAAAAGAAAAAAACAACACCAAAGTTGAATGTGAAAGAACAGCCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTGACTCCAACAAGCACCAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACCATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAATCAAATTCCACAGAACTTCCTGAGTTACTAAGAAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAACTTCACTGAATTAGAAGCAGAACTGAACCACCAGAGAAACCTTGCACTGAAGCACATTGAACATCACAGACTCAACGGCATTGTACACTTTGCTGGCCTTTCCAATGTCTATGATCTCCAATTCTTCAATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACTGCATTGTTAGCTGCACATAGGAAAAAAGTGAAAATCGAAGGACCTGTTTGCGATTCGTCACAAGTGATTGGTTGGCATCTAAGAAATATGAACAATGAAACTGATACAATCACTCCCCCAATTCATATTTCAAGTTTTGCATTCAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGATTGTTCCAAAATCTTGCTTTGGCGTTTCAATTTTCGTGGCCGAACCACCTCAAATCACTAA 1044 0.4128 MKMGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTQFAPQPSEKSHLTTNVNKSWLAPTPVTTPMKPGILEHEKKKTTPKLNVKEQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKSNSTELPELLRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFNQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRGRTTSNH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02931 347 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 15 343 IPR005027 GO:0015018|GO:0016020
Spst1g02931 347 FunFam Glycosyltransferases 112 347 - -
Spst1g02931 347 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 112 347 IPR029044 -
Spst1g02931 347 Pfam Glycosyltransferase family 43 134 338 IPR005027 GO:0015018|GO:0016020
Spst1g02931 347 CDD GlcAT-I 112 339 IPR005027 GO:0015018|GO:0016020
Spst1g02931 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 112 340 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02931 Spst-Chr1 37911075 37913174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02931 3 343 Glycosyltransferase AT2G37090 61.236 1.14e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02931 K20869 - gmx:100785607 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02931 1 37911075 37913174 Spst1g02931 1 37911075 37913174 ECH
Spst1g02931 1 37911075 37913174 Spst7g00798 7 8334644 8336621 PCT