Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02923 ATGGCGAAGAATGGGGAAAGAAGCCGCACAAGTGAAGTGGAGGGTAGGAGTGAGACACAGGGTTTAGGTATTCCTCTGCCTCCATTCTTTCTCAATCACTCTCCCAGACCACCCGAGCTGCTCCCTCACACCTGCCTCACCTCACTTCCCAGCCCACCCGCACTCCACACAACTACCAACTCACCCAGCTCCTCCCTCACTCACCCTCGCCCAACACCCTCACTCACCCTCGCCCAACTCACGCAGCCCATCGCCTGCCATCTGGGGCCGCAAGCCACCCTCCAGCTCAAGCTGCCGCGTACCATCGAAACCCCTGCGCCGCGCCGCGCCAACCACCAAGCCCCAGCCCTAATCTTCGCGCCTTCAACCCCAAAACCTACCGCGAGCCACCCACAAGCCCGGTTCGCTTCATCTTCTGCACTACACATCAAACGGTGCGTTTCACCCACAAAATCGACAGCGTTTTGCGACGCGATGGCTTCTTCTCGACTCGATTTCTTGTTCTGCCATTTGTGTGGGACAATGCTCACTGTCCCTTCCACTCAGTACGCCCAATGCCCTTTGTGCAAAACTCGCCGAGCCATACAAGATATTCGTGATAAGGAAATAAGTTACACAATTTATGCTGAGGATATCAGAAGAGAGCTTGGAATGGAAATAATTGAGGAACAGAAGGTGCAATTGTCTAAGGTCAACAAGAAATGTGAAAAATGTGGTCATGATGAAGCTAACTTTTACACCAGACAGATGAGATCAGCAGATGAAGGGCAAACTACTTTCTACACATGTACCCGCTGTGGTCATCAATCTCAGGAGAATTAG 822 0.5255 MAKNGERSRTSEVEGRSETQGLGIPLPPFFLNHSPRPPELLPHTCLTSLPSPPALHTTTNSPSSSLTHPRPTPSLTLAQLTQPIACHLGPQATLQLKLPRTIETPAPRRANHQAPALIFAPSTPKPTASHPQARFASSSALHIKRCVSPTKSTAFCDAMASSRLDFLFCHLCGTMLTVPSTQYAQCPLCKTRRAIQDIRDKEISYTIYAEDIRRELGMEIIEEQKVQLSKVNKKCEKCGHDEANFYTRQMRSADEGQTTFYTCTRCGHQSQEN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02923 273 MobiDBLite consensus disorder prediction 1 74 - -
Spst1g02923 273 MobiDBLite consensus disorder prediction 50 74 - -
Spst1g02923 273 SUPERFAMILY Zinc beta-ribbon 222 272 - -
Spst1g02923 273 CDD Zn-ribbon_RPA12 230 273 IPR034004 GO:0006379
Spst1g02923 273 PANTHER DNA-DIRECTED RNA POLYMERASE 166 272 IPR012164 GO:0003899|GO:0006351
Spst1g02923 273 ProSiteProfiles Zinc finger TFIIS-type profile. 231 271 IPR001222 GO:0003676|GO:0006351|GO:0008270
Spst1g02923 273 Gene3D - 219 272 - -
Spst1g02923 273 FunFam DNA-directed RNA polymerase subunit 208 272 - -
Spst1g02923 273 SMART Cys4_2 233 272 IPR001222 GO:0003676|GO:0006351|GO:0008270
Spst1g02923 273 Pfam Transcription factor S-II (TFIIS) 234 269 IPR001222 GO:0003676|GO:0006351|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02923 K03000 - gmx:100527489 203.371