Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02913 ATGCACCCTCTCCCTGATATATATAATACCACATCCCTTCCAACCACTTGTAACAAAAATCTTAGTCTTCTTATTTTTAGCATTTTCCTCACACTAATGGCAAAGCTATTCCATTTCCTCCTCCTCCTCTTCATCCAAACAATAACAGCCCAAGTAGCACCAGCACCAGCAGGACCCACCAACATCACCCAGGTCCTAGAGAAAGCAGGCCAATTTACAACCTTCATCAAACTTCTCAAAGCCACACAAATAGCTGACAGACTCAATTCACAACTCAACAACTCAAACCAAGGCCTAACTGTGTTTGCACCCACTGACAATGCATTCTCAAGCCTAAAAGCAGGAACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGGTGCAGTTCCACATCCTCCCCACTCTCTACACCATCTCACAGTTCCAAACCGCCAGTAATCCTTTGCACACACAAGCTGGGAACAGTGACGACGGAGAGTACCCTCTGAATGTGACCACCTCAGGGAACCAAGTGAATGTATCAACCGGGGTGGTCAATGCACCAGTGTCCAACACTATCTTCAGTGATAACCAGCTTGCAGTGTATCAGGTCGATAAGGTGCTTCTTCCTATGGCACTCTTTGGCTCCACGGCGCCGGCTGCAGCACCGGCAGAGGCTCCGGCGCCGACCAAGCCGGAGAAAAATGTCCGGGCAGGGGAAGCTGATTCTCCATCAGGGTCTTCGGACTCGTCGGTTGATGCTTCGAGTGCAGTGAGTTTGAAAAGGAAGACAGTTGAAGTTGTTACCTTCGTTGCTGCTGGGATTGCTGTTTCTTGTTTCTGA 828 0.4831 MHPLPDIYNTTSLPTTCNKNLSLLIFSIFLTLMAKLFHFLLLLFIQTITAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKATQIADRLNSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLVQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVSTGVVNAPVSNTIFSDNQLAVYQVDKVLLPMALFGSTAPAAAPAEAPAPTKPEKNVRAGEADSPSGSSDSSVDASSAVSLKRKTVEVVTFVAAGIAVSCF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02913 275 Gene3D FAS1 domain 45 206 IPR036378 -
Spst1g02913 275 ProSiteProfiles FAS1/BIgH3 domain profile. 59 203 IPR000782 -
Spst1g02913 275 FunFam Fasciclin-like arabinogalactan protein 11 43 205 - -
Spst1g02913 275 SUPERFAMILY FAS1 domain 58 205 IPR036378 -
Spst1g02913 275 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 37 259 IPR045003 -
Spst1g02913 275 SMART fasc_3 100 206 IPR000782 -
Spst1g02913 275 Pfam Fasciclin domain 71 205 IPR000782 -
Spst1g02913 275 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02913 Spst-Chr1 37707648 37708475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02913 - - pvu:PHAVU_001G176400g 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02913 1 37707648 37708475 Spst1g02913 1 37707648 37708475 ECH