Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02902 ATGGCCTCAAAAAAGGGCTTCCTTTCGAAGGTAAGTTTCATGTTTGCATCGTCAAACACCGATTTGGAGGCAAAATCCACAGAGGGTGAGATGGAATTGGATGAAGCTGATGTGTGGAACTGGAACTTATCCAACAACAACGACACTGTAACAGAGTCAAAGAAGAGACCACAATCTGGTAAGAAGAAAGTGTGTAAAAAGGTGGAGGGTGGTGGCAGAGTGAACCCTGTGGTGTCATGCTCAATGCCAGTGAATATTCCTGATTGGTCCAAGATTTTGAAGGATGACTATGAGGAGCACGAGAAGAGAGATTTTGTTAGTGACGACGATGATAATGATGGTGGGGAACGAGTACCCCCTCATGAGTATCTTGCTAGAACCAGAGGGGCTTCACTCTCTGTGCATGAAGGAAAAGGAAGGACCCTCAAAGGTAGAGACTTGCGCAGTGTTAGAAATGCCATTTGGAAGAAATTTGGTTTTGAAGATTGA 489 0.4458 MASKKGFLSKVSFMFASSNTDLEAKSTEGEMELDEADVWNWNLSNNNDTVTESKKRPQSGKKKVCKKVEGGGRVNPVVSCSMPVNIPDWSKILKDDYEEHEKRDFVSDDDDNDGGERVPPHEYLARTRGASLSVHEGKGRTLKGRDLRSVRNAIWKKFGFED 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02902 162 MobiDBLite consensus disorder prediction 37 68 - -
Spst1g02902 162 Pfam Senescence regulator 46 162 IPR007608 -
Spst1g02902 162 MobiDBLite consensus disorder prediction 100 123 - -
Spst1g02902 162 MobiDBLite consensus disorder prediction 54 68 - -
Spst1g02902 162 MobiDBLite consensus disorder prediction 39 53 - -
Spst1g02902 162 PANTHER EMB|CAB72159.1 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02902 Spst-Chr1 37611146 37611634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02902 - - vra:106757485 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02902 1 37611146 37611634 Spst1g02902 1 37611146 37611634 ECH
Spst1g02902 1 37611146 37611634 Spst7g00823 7 8713028 8713564 PCT