Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02899 ATGGAGACACGAGGTGAGATTACGCATTCAAAGTTCAATAGGATTTGTGTGTTCTGTGGAAGTAGCCCCGGCAAGAAGAGTAGTTATCAAGACGCTGCCATTGAGCTTGGCAATGAATTGGTCTCAAGGAACATCGATCTGGTGTATGGTGGGGGAAGCATTGGTCTAATGGGTTTAGTTTCTCAAGCTGTTCATGATGGCGGTCGCCATGTCATTGGGGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACGGTGGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAAGCAGAGATGGCCAAACATTCAGACGCCTTTATTGCCTTACCAGGAGGGTATGGGACTCTAGAGGAGCTTCTTGAAGTGATAACCTGGGCACAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCGGTGGAAGAGGGATTTATCAGTCCAAATGCTCGCCACATAATTGTATCAGCACCAACAGCAAAGGAGTTGGTGAAGAAATTGGAGGATTACGTTCCCTGTCATGAGGGTGTTGCTTCAAAGTTGAGCTGGCAGATAGAACAGCAGCTTGCATACCCCCAAGATTATGACATGTCAAGGTAG 660 0.4606 METRGEITHSKFNRICVFCGSSPGKKSSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQIEQQLAYPQDYDMSR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02899 219 NCBIfam Rossman fold protein, TIGR00730 family 14 190 IPR005269 GO:0009691|GO:0016787
Spst1g02899 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Spst1g02899 219 Gene3D - 3 189 - -
Spst1g02899 219 FunFam CASP-like protein 3 189 - -
Spst1g02899 219 PANTHER LOG FAMILY PROTEIN YJL055W 6 215 - -
Spst1g02899 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02899 Spst-Chr1 37596114 37599968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02899 K22522 - gmx:100810030 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02899 1 37596114 37599968 Spst1g02899 1 37596114 37599968 ECH