Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02896 ATGTTTATCCCTACTTCGCTTGCATCTGATTTCGTTGCCTCTGTTATCTCTTACTTGAGCTTTTCCACTCGCCGAGGGTTTTACCTCTTTCGCTTCTTCTGCAACTACGTTTACTTCTTCTCCGTCAGTTTGGACCTGAGAATATTTGTTGCTCTGATTATTGGTGTTGCTAAGGGTTTTTTTTTGAGGGAGTTTTCATATGGATTTGGTTGCGTGTTACTTGTTTCTACTTTTGAGGCTTGGATGGGGAAATTCGAGTGGGGAAGCGATGATGATGGTCAGGTTGACGCTAGTAATGAAATTGTTGCTGATGGGAATATTATTGGCTGGCTGGTGGCATACACTGTTGTGCTACATGTTAAACTTTTGCAAGTTGCAAAATCTATTGATAGAAAGATAGTTATGTTGCATAGCCTTATTGTTGCTGGTATGATATCAAAGAGTAAAATGGAAGCAGAGACATTAAGTCCCAACCACCCTCCTAGCTTTCTGCGTCAGTCACTTCCTGCTGTTGTACCTATGCTTTTGATTTCTACAGGATATATTGACCCTGGAAAGTGGGTAGCGACTGTTGAAGGTGGTGCTCGGTTTGGGTTTGATCTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCTATATTCTGTCAGTACATATCTGCCAGGATTGGCGTAGTTACAGGAAAAAATCTAGCCCAGATTTGCAGTGATGAGTATGATACATGGACATGTATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATAATGCTAGACCTTAACATGGACATTGAGAAGGCAAAAATCCTAGGCCAGTTTGTTGCAGGCCTTGTACTGCTTTCATTAATTCTTGGACTGCTTATCAATCAACTAGAAGTACCATTTCCTGTGCATGGAATACTAATAAGGTTGAGTGGGGAGAGTGTATTTGCGCTAATGAGTCTTCTAGGAGCAAATCTGGTACCTCACAACTTTTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGGCCCACAAGCATTTCTAAGAATGCTTTGTGTCATAACCATTTTTTGGCCATATTATGTGTTTTCAGTGGTCTTTATTTGGTGAATAATTTGCTGATGATCGCCTCGGCAAATGAATTCTTCAGTATAGGGCATGTTCTGCTAACATTCCAGGATGCATTGTCACCAATGGAACAGGTTTTAGGTTACCCAATAGCTCTGCTTGGATTTTTACTCCTTTTGTTTCTTGCAAATCAAATCACAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTAGTGCAAGGTTTCTTAAAATTGGATATTCCAGGTTGGCTTCATTATGCGACAATTAGAGTGATTACCGTCTTGCCTGCCCTTTATTTTGTCTGGAGTTCAGGAGCTGAAGGGATGTATCAGCTGCTATTATTCACTCAAGTTTTGGTAGCTCTACAACTTCCATCTCAAGTGATCCCCCTTTTTCGAGTTGCTACATCTAGATCAATAATGGGTGTACACAAGATTTCCCAGTTTCTGGAACTTTTGGCATTGATCATATTCATTGGGATGCTTGGTTTGAATATTGCCTTTGTGGTAGAAATGATGTTTGGAAATAGTGATTGGGCGAGTGATTTGAGATGGAATGTGGGGAGTTGTGTGTCTGTCTCATATTTAGTCCTTCTAATAGCTGCTTTTACATCGTTATGTTTTATGCTTTGGTTAGCTGCCACACCTTTAAGATCTGTTAGTGTGCGATTAGATTCTCAGACATGGGACTGGGATACGCCAAAGACTCAGCCAAATCCACCAGTTATCGGTGAAGAATCGTATTTAACTGAAAAAAGGTATCGGGAAGATGCATCTATGCATGTGGGGGAATCCACACCAGCTGTGGCAAAGACCTTGGAGTACTCAGATGTGTCACTTTCAAGTTTTGATCCTGCTCTACTTGAATCTGTGATGGAACCTGAACCCCATGTAAATGTTGCAAGGGAGAACCATTCTGTTGAGTCGGCTTCCACATCAGAGTCAGTAACAACTGTAATTAATGAGATTTCCAATTCTCAACTGGAAGACACCAAAACTGTAACAATGGAAACAAATAACCCAATTGAGAAAACTAAGGAAGTTGAAGGAAATTCAAATGCTGAAAGGGATGATGATGATGATGGAGATTCATGGGAAGCTGAAGAACCTTCCGGAGTTGTGTCAGCAAATGTACCATCTTCAACATCTGATGGCCCTGCATCATTCAGGGGTCTCAATGGCAAAAGTGATGAAGGAGGGAATAGCTTTGGAAGTCTTTCGAGAATAGGAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTGCCGTTCTTGATGAATTCTGGGGACAACTATATGATTTCCATGGCCATGTAACCCGGGAAGCAAAGGCTAAGAAAGTTGACCTTTTACTCGGAGTAGGTGTTGACTTAAGACCTACCAGTTCTTTTCCAAGAGTGGACGCGTGTAGAAAGGACTATTCTGAATACTTAGGATCAGTAGGAGGTAGAACTTCTGACTCTTTAGTGAAGCCTGATCCATATGATTCTTCCGAGCAGCCTAGGATGCAATACAATTCTGAGTTTTCTTATGGCCTCCAAAGGAGTACTTCCTCAAGGCAGGCAAGTCCCATTCAGTTATTGGATGCATATATGCAGAACTATAGCCACAATCTCCTTGATTCTGGTGAGAGGCGCTATTCCAGTGCGCGCAATCTACATTCATCAGATGCTTTGGATTATGAACCAGCTACCGTACATGGTTATCAGACTGCGTCCTATCTTAGTCGGCTGGGTAAAGACAGAGATTTTGCAAACTTAAATGGTCCCGTGGACTTGTCATCGCTGAAATCCCCTTCCATAGTTAATGCAAAGTACAGGGATTCTCTTGCCTTTGCTTTGGGGAAAAGGTTGTGTAGTGGTCCAAGTGTAGGTCAACCCCCAGGGTTCCCAAAAGTAGCTATCTCTAGAGATTGCCAATTACAATCTGAGAGGTCTTTTTATGACTTTTACCCTTCTGGTTCTGCAGATAATACAGTCAACTCAGCTAATACTAAAAAGTACCATAGTTTGCCGGACATTTCAGGATGCTCCATCCCCCAGAGGGCTGGTTACGTGTCTGATAAAAATGCTAGTAGGACGTGTTATGAAGGATCACCATATTCAAATTCTGGATCAAGAACAGGAGGTCATTTGGCCTTCAATGAATTCTCTTCATCAAAAACTCACTACGAGGCACTCTCTTCACAGTTGAACTCTGGTTTTGATGCTGGATCCCTCCGCTCTAGACAACCTAGTGAGCAGTTTGGGCCTGAGAAAATTCGTAATATTGCAACGGAAGGTGTCGGAAATAGGTCTAATGCCGTTGTTCAAGAAACTACTTCATTTGTGGATATTGAGCAGAAACTTCTTCTGTCAGTTAGACTTTGCATTGTGAAGCTCTTAAAATTGGAAGGGTCTGATGGGTTGTTTAAACAGAATGGTGGCGCTGACGAGGATCTGATATATTGTATTGCCGCAAGGGAGAAGGTTGTATGTGATTTTGAAAGGGAGACGACGAGTCAAGTCAATCATATGGGTGAAGCTCACTATTTTCTTTCTGATAGGAAATTAGGTTGCACTTCGTCTCTAGTCCCTAATTGCGGGGAGGGATGTATATGGAGAACAGATTTGATAATAAGCTTTGGGGTTTGGTGTATCCACAGTATTCTTAACCTTACACTTGTAGAAAGCCGGCCAGAGCTTTGGGGGAAATACACCTATGTTCTCAATCGCCTCCAGGGCATAATTGATCCAGCTTTCTTTAAGCCTCGTAGGCCCTTGGCCCCATGCTTTTGCCTTCAAGATGTAATGACGCGTCAGCAAAAGTTAAATCCCCCTCATGCCAATGAGATGCTACCCCCAACCGCAAAACCAAGCCGGGGAAAATGCACAACTGCATCAGTGTTGCTTGAACTTATCAAGGATGTGGAGTTTGCGATCTCTAGCAGGAAAGGACGTACAGGAACTGCTGCAGGTGATGTGGCTTTCCCAATGGGGAAGGAAAATTTGGCGTCCGTTCTCAAACGGTACAAGCGGAGGTTATCTAACAAGCCACCGGGCACTAATGAATGCACAAGTTCACGCAAGACCCCACGTTAG 4146 0.4279 MFIPTSLASDFVASVISYLSFSTRRGFYLFRFFCNYVYFFSVSLDLRIFVALIIGVAKGFFLREFSYGFGCVLLVSTFEAWMGKFEWGSDDDGQVDASNEIVADGNIIGWLVAYTVVLHVKLLQVAKSIDRKIVMLHSLIVAGMISKSKMEAETLSPNHPPSFLRQSLPAVVPMLLISTGYIDPGKWVATVEGGARFGFDLMAFMLIFNFAAIFCQYISARIGVVTGKNLAQICSDEYDTWTCMLLGVQTELSVIMLDLNMDIEKAKILGQFVAGLVLLSLILGLLINQLEVPFPVHGILIRLSGESVFALMSLLGANLVPHNFYLHSSIVQWHQGPTSISKNALCHNHFLAILCVFSGLYLVNNLLMIASANEFFSIGHVLLTFQDALSPMEQVLGYPIALLGFLLLLFLANQITALTWSLGGEVVVQGFLKLDIPGWLHYATIRVITVLPALYFVWSSGAEGMYQLLLFTQVLVALQLPSQVIPLFRVATSRSIMGVHKISQFLELLALIIFIGMLGLNIAFVVEMMFGNSDWASDLRWNVGSCVSVSYLVLLIAAFTSLCFMLWLAATPLRSVSVRLDSQTWDWDTPKTQPNPPVIGEESYLTEKRYREDASMHVGESTPAVAKTLEYSDVSLSSFDPALLESVMEPEPHVNVARENHSVESASTSESVTTVINEISNSQLEDTKTVTMETNNPIEKTKEVEGNSNAERDDDDDGDSWEAEEPSGVVSANVPSSTSDGPASFRGLNGKSDEGGNSFGSLSRIGGLGRAARRQLAAVLDEFWGQLYDFHGHVTREAKAKKVDLLLGVGVDLRPTSSFPRVDACRKDYSEYLGSVGGRTSDSLVKPDPYDSSEQPRMQYNSEFSYGLQRSTSSRQASPIQLLDAYMQNYSHNLLDSGERRYSSARNLHSSDALDYEPATVHGYQTASYLSRLGKDRDFANLNGPVDLSSLKSPSIVNAKYRDSLAFALGKRLCSGPSVGQPPGFPKVAISRDCQLQSERSFYDFYPSGSADNTVNSANTKKYHSLPDISGCSIPQRAGYVSDKNASRTCYEGSPYSNSGSRTGGHLAFNEFSSSKTHYEALSSQLNSGFDAGSLRSRQPSEQFGPEKIRNIATEGVGNRSNAVVQETTSFVDIEQKLLLSVRLCIVKLLKLEGSDGLFKQNGGADEDLIYCIAAREKVVCDFERETTSQVNHMGEAHYFLSDRKLGCTSSLVPNCGEGCIWRTDLIISFGVWCIHSILNLTLVESRPELWGKYTYVLNRLQGIIDPAFFKPRRPLAPCFCLQDVMTRQQKLNPPHANEMLPPTAKPSRGKCTTASVLLELIKDVEFAISSRKGRTGTAAGDVAFPMGKENLASVLKRYKRRLSNKPPGTNECTSSRKTPR 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02896 1381 MobiDBLite consensus disorder prediction 679 757 - -
Spst1g02896 1381 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 266 570 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst1g02896 1381 Pfam Natural resistance-associated macrophage protein 274 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst1g02896 1381 Pfam Natural resistance-associated macrophage protein 187 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst1g02896 1381 PIRSF EIN2 262 1380 IPR017187 GO:0009873
Spst1g02896 1381 PIRSF EIN2 150 272 IPR017187 GO:0009873
Spst1g02896 1381 MobiDBLite consensus disorder prediction 679 697 - -
Spst1g02896 1381 MobiDBLite consensus disorder prediction 730 745 - -
Spst1g02896 1381 MobiDBLite consensus disorder prediction 838 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02896 Spst-Chr1 37559200 37578733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02896 150 1372 Miscellaneous Gene Families AT5G03280 48.352 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02896 K14513 - gmx:100813034 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02896 1 37559200 37578733 Spst1g02896 1 37559200 37578733 ECH
Spst1g02896 1 37559200 37578733 Spst7g01024 7 18245939 18252414 PCT