Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02887 ATGGCAGTGCCTCCATCGTCGTTAGAGAAGCAGTTCGACGCGTTTAGGGTTCAGCTCGAACAATCTGGAAAGCTGCGTGACCAAATTCGAAGCGTTGTTTCGGAGATTGAGTCCTCCACTAGGCTCATCTATGCGACTCTTCTTCTCGTTCACCAGTCTCGCCCCACTCCCGAGCTTTTAGAGAAGGCCAAGTCTCAAGTCAATGTGTTAAAAGAGCAGTATAAGCAACTTGCTGAAGTTCTTGGAGGAAGTCCTGGGCAATACCATAGGTATCATGGTGACTGGAGGAGTGAAACACAGACTGTAGTTTCGATGCTTACGTTTATGCACTGGCTTGAAACAGGAAGCCTTCTCGAGCATAAAGAGGCTGAGGAAAAACTTGGGTTGAATTCAGACTTTGGTCTAGATGTTGAAGACTACTTAATAGGTGTCTGTTTTATGTCTAATGAATTGCCTAGGTATGTGGTGAATCAAGTGACAGCTGGTGACTATGATTGTCCAAGGAAGGTCTTGAAGTTCTTGACAGACCTCCATGCTGCATTTCGAATGCTTAATCTTCGCAATGATTTTTTGCGAAAGAAGTTCGATGGCATGAAGTATGACCTAAGAAAAGTAGAAGAGGTTTACTATGATGTTAAGATTCGGGGTTTGACACCGAATGGTGAGCCAGTTCATGACTTGGAGACCAAGGAATCATAG 699 0.4449 MAVPPSSLEKQFDAFRVQLEQSGKLRDQIRSVVSEIESSTRLIYATLLLVHQSRPTPELLEKAKSQVNVLKEQYKQLAEVLGGSPGQYHRYHGDWRSETQTVVSMLTFMHWLETGSLLEHKEAEEKLGLNSDFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGEPVHDLETKES 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02887 232 Pfam Translin family 26 216 IPR002848 GO:0043565
Spst1g02887 232 SUPERFAMILY Translin 7 217 IPR036081 GO:0043565
Spst1g02887 232 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 5 220 IPR002848 GO:0043565
Spst1g02887 232 FunFam Translin family protein 133 230 - -
Spst1g02887 232 Gene3D Translin; domain 1 3 133 IPR016068 GO:0043565
Spst1g02887 232 Gene3D Translin; domain 2 134 231 IPR016069 GO:0043565
Spst1g02887 232 CDD Translin 15 216 IPR033956 GO:0003697|GO:0003723|GO:0016070
Spst1g02887 232 FunFam Translin 4 134 - -
Spst1g02887 232 Coils Coil 60 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02887 - - gmx:100811968 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02887 1 37474264 37477580 Spst1g02887 1 37474264 37477580 ECH