Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02867 ATGCTGATGGAAGGGCTATCTCCGGATGAGGTGGTCTTCACAGTCTGTAGTCATGCTGGGCTTGTTGATGAGGACCGGGAATACTTCCAATCCATGAAGGAAAGATACTACATTAGCCCTTTACCTGACCACTATGCGTGTATGCCTCATGCTGGTGCATGGGGTGCACTTCTTGGGGCATGTAAACTCTACGGTGATTCAGAGTTGGGAGAGATTGTTGCTAATCGACTTTTTGAGTTTGAGCCTCTAACTGCCGCTAACTATGTGTTGTTGTCCAACATCTATCCAGCAGCAGAGCGATGGATTGATGTTTCCCTTGTGAAAAGCTTGTCAACATGGAGATCGATAGAGCAATCAGAGAGTGTGACGATTGAAGACTTCAGACCAAGTACAATAATGCCACCTATTATAAATCAGAAGAGGAAAAAAGTGTTATGTGCTGTTGACTTGATTTTTGTTGTCAGTATTGAGGAGGTTGCATTCAGCTTCAATGGAGAAAAAGATTCAACAGTTTTGTTGCACATACTCAGGGCTGGTTATTTCTTGCATAAAAAGGGCCAAAATAGTGTCAATGGGGATCTAAAAGATTTTCCAATTCGAACAATATATTTTGAGAGCCCTTGTGCATTCCCAGAAATAAACTCATTTACCTATGATGCTGCTGCTACATATGGGTTGCAAATTGACACCATTAGCTTAGATTTCAAATCTGGTTTGGAGGCTTTGCTAAAGGAAAAACCAATTTGA 747 0.4163 MLMEGLSPDEVVFTVCSHAGLVDEDREYFQSMKERYYISPLPDHYACMPHAGAWGALLGACKLYGDSELGEIVANRLFEFEPLTAANYVLLSNIYPAAERWIDVSLVKSLSTWRSIEQSESVTIEDFRPSTIMPPIINQKRKKVLCAVDLIFVVSIEEVAFSFNGEKDSTVLLHILRAGYFLHKKGQNSVNGDLKDFPIRTIYFESPCAFPEINSFTYDAAATYGLQIDTISLDFKSGLEALLKEKPI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02867 248 Pfam E motif 64 110 IPR046848 -
Spst1g02867 248 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 49 114 IPR046960 GO:0003723|GO:0009451
Spst1g02867 248 Gene3D HUPs 116 248 IPR014729 -
Spst1g02867 248 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 157 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02867 Spst-Chr1 37263182 37269143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02867 1 101 Glycoside Hydrolase AT3G49170 35.938 3.89e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02867 - - gmx:100816619 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02867 1 37263182 37269143 Spst1g02867 1 37263182 37269143 ECH