Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02864 ATGGCGTCTCGATTTGATTTCGTGCTCTACGACGAAGACCTAATCGCATCGCGACCTCTCATCGGGATCCCCGCACTATATGGAGTCACCGACGACGAAGAAACCAACGATGAAGACGAAGACGATGAAGAGTACGTTCCCGGTGTGGCGTCCCCTAGGGCTTCGCACGACGCTCCTCGTGTCGTTTCATCCAATAACGTAATCGTTATCCCCGACGAATCGCAGGATTGCGAGGTTAACAAACGCCGCAGAATTGAAGGAGGGGATGCTTCTTGTTCCTTAGCGATTGGGAGCAGTGACAGTAGCCAAGGAAACGAACACACCGATATTGACGGTCTTTTTTGCCCTATTTGCATGGATGTTTGGACCAACGACGGCGAACATCATATCTGGTGCAACCGCATTTCCCATGCCCTATATTACACACACTACCGCACGCACGCACTATGTGATGTGAGGAAACTCTTTGCTTCCCGAGTAGTTGCGGTGGAAGAAAAATCTCAGAAGAAAATTCGGTCACTCGAGGTCAAATGTGCTGCCCTTGAAAGTAAGGGAAGTGATTGGCACAAGAAAGAAGCCGGATGGAAGTGTAGGGAAGCTGACTTGCGTTTTCAAGTTCAGAAGCTTACAGAGAGCAGGCAATCTGCATTGATAAGTGGCAATCAAAACACTCAGTGGAGATGTGAATCTGAGCACAACTTTGTCCCAAAGTACTGTGGAAAGAGATCCATTTGTAATTTTGAATTGCAGAATGAGTTTCATCTGGATGGTGCACACATTTTTGATATGGACATTTCTAATCAAATTTTATTAATTGCACAAAGGCCAAAGGAAGTAGGTGGAGTGCATTTGCTAACTAAAATGAGCTTGTTGTCTCCATGTGAGATGCAAGATATCTTACTGCCTTCTGCTACAAATGGTGTTAAGGACCTGCATATTTCTTCTTCTAAAAGTAGCCTGGCTCTTTTTGCTTCATTAGGAAAGAAACTATCAGTGCTCAGCTTGGACAGTGGCAACGTTGTTATCAATTATGATCTACAGGATCCTGCATGGTCTTGTTCGTGGGATCTCAACAATTCGCATAACATATATGCTGGACTACAGAATGGTTCTGTGTTGGTGTTTGACATGCGTCAAACTGTAGGACCCATGAAATCTTTAGTTGGTTTGACTAACAACCCTGTGCATACTGTACATTCTCTTGCACAAACTTCAGGTCTTTCTTCGGGTGTTGGAACGATCCTTTCAGCATCTGCCATTGGCCTTTCTCAGTGGAACATTGAATCTGAAGAACGGCCGCTTGTGGTTCCTGAAACTAACAATCAAGGAGTTTGCATATCCCTTGCCTATTGCCCTAGCAGTGATGACATTGTTGCTTCTTACCGGCCCACATTCAATATGTCCACGGATGTGCCTCTATCTCAACCATTGTCCACTCCTCTTAGTGCTGGACAAGGAGTACAGGGGACTCATGTCTTGTTCAATAGAATGGGTAGTCATCATTTTCAAAAGGTGGGTTCCTCATATGCCAATGTAAGTAAAATTCGACTACCAAAATGTGTAATTATGGACATAGAGAATCAGAGCAGATTGTTTGCATCTTGGGATGAAGTTACATGTGATTTGGTCTTGCATGAGTTGCCATCTTTTAGAGTTCTTCAGCAATTCAAATTGCCAGCTCATGCCCGTGATATTAGGTACTCACCTAGCCACGGCATACTTGGTTGTTTAAGTGAGAGCACGTTGCAACTCTTCCATTCCAAACACTCGTCGGTAAGGTAA 1782 0.4456 MASRFDFVLYDEDLIASRPLIGIPALYGVTDDEETNDEDEDDEEYVPGVASPRASHDAPRVVSSNNVIVIPDESQDCEVNKRRRIEGGDASCSLAIGSSDSSQGNEHTDIDGLFCPICMDVWTNDGEHHIWCNRISHALYYTHYRTHALCDVRKLFASRVVAVEEKSQKKIRSLEVKCAALESKGSDWHKKEAGWKCREADLRFQVQKLTESRQSALISGNQNTQWRCESEHNFVPKYCGKRSICNFELQNEFHLDGAHIFDMDISNQILLIAQRPKEVGGVHLLTKMSLLSPCEMQDILLPSATNGVKDLHISSSKSSLALFASLGKKLSVLSLDSGNVVINYDLQDPAWSCSWDLNNSHNIYAGLQNGSVLVFDMRQTVGPMKSLVGLTNNPVHTVHSLAQTSGLSSGVGTILSASAIGLSQWNIESEERPLVVPETNNQGVCISLAYCPSSDDIVASYRPTFNMSTDVPLSQPLSTPLSAGQGVQGTHVLFNRMGSHHFQKVGSSYANVSKIRLPKCVIMDIENQSRLFASWDEVTCDLVLHELPSFRVLQQFKLPAHARDIRYSPSHGILGCLSESTLQLFHSKHSSVR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02864 593 Coils Coil 164 184 - -
Spst1g02864 593 Gene3D - 167 469 IPR015943 GO:0005515
Spst1g02864 593 PANTHER RFWD3 PROTEIN 32 134 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Spst1g02864 593 MobiDBLite consensus disorder prediction 31 45 - -
Spst1g02864 593 SUPERFAMILY WD40 repeat-like 247 556 IPR036322 GO:0005515
Spst1g02864 593 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02864 Spst-Chr1 37239528 37244631 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02864 K15691 - gmx:100818898 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02864 1 37239528 37244631 Spst1g02864 1 37239528 37244631 ECH