Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02848 ATGTCTGGCCCCGTGGCCATAGCTGATTATTCAAATGGAGGAGAACTTTCTTGTGCAGAGAGAACAAAATCTCGTGACGTGCTTCCTGAATTAGACCAACTTTCTATATTGACAGACGGTGAAAGTGAAGGCTTTAGTGTTGGACAACTCTTACTTTCTAATGGAGACTCATATTCTGGGTTCCTATATGGCAATGTTTCTGAGGGCCACGGGACGTACGTTTGGTGTGATGGCTGTGTATATGAGGGTGAATGGAGGCGAGGGATGAACAATGGATACGGAAAGATAAAATGGCCTTCTGGAGCAGTGTATGAAGGTGATTTCTCTGGTGGATATATCCATGGTACGGGCAGATATATTCGTTCCGACAAATTGACCTATAAAGGTAGATGGCGGTTGAATCTTAAACATGGTTTGGGGTATCAAGTTTATCCTAATGGAGATACCTTTGAAGGGTCTTGGATGCAAGGAACACCAGAGGGGCCTGGCAAGTATACCTGGACCAACGGAAATGTTTATGTGGGGAATATGAAAGGTGGAATAATGTCAGGAATAGGAACTCTTACCTGCATAAATGGGGACTCATATGAAGGAAACTGGCTAAATGGCATGATGCATGGCTTTGGAGTGTATACTTGGAGTGATGGAGGATGTTACGTTGGAACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTATCCAAGAGGTAGTAGCCGGCTTCCATCAGTGCAAGAAATTTATCTCAGTGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAGAAAACAGAAGCAAGTCAGAGATGTCAAGGTACCAGACAACCAGCTGTCAAGTATTGTTTCATCTGACAAGGTTGCAAAAGGAAACCTGTTAAATCTGGAACAGTCTAATAGAAGAAATGTGTCTCTTGAAAGGCGTTGGAGTCTTGAGGTTTCGATTGAGAAAGTGATTGGATATGATTCAGCATTAGGATTAGCAGATTCTATGCCAGAAAGTAAAGACAAAGAGGTTGATACAACGATCCCAATATTGGAACGAGAGTACATGCAAGGTGTATTGATAAGTGAAGTTGTGTTAAATAATATGTTTTCATCAATGTCTAGAAGGGCAAGGCGACTTCAAAAAAAGCTTGCCAAAGAGATTAAAAAACCTGGTGAAGCAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCTGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATAACACCTATACCTACGCGAGAAGTTAGATTATCAGATTTTGGTACCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTACCCATCCATCAGAAGATTTTAAATGGAAAGATTATTGCCCCATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGACGCTGCCGACTACATGATGTCCATCTGTGGGAACGATACTCTGAGGGAACTATCTTCTCCAGGGAAAAGTGGTAGCGTCTTCTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGCGCCTGTCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTTATCACAAAATTTTTTGGCCTCCACAGGATTAAGCCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACGGAACTACGGATCCATCGGAGATTTGATTTAAAAGGTTCATCCTTTGGACGATCATCAGACAAGATAGAAATTGACGAAAATACAACACTGAAAGATTTGGATCTGAACTACTGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGCCTTCTTCTAGGTGTTCATTATCGAGCTCCGCAGCATCTGCGACCTCTCATGTCGTACAACCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGACCCTCTGGAGGATGAAGCATCCTATCCAGAAGGCCTTGTTCTAGTTCCTAGAGGAGCAGACGATAACAGCGTTGTTGTGGGCTCACATATGAGGGGTAGTCGGTTGCGGGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTTGGTGTGAACATGCCTTCAAGGGCAGAGCAGATTTCCGGAAAACAAGAAAAGCAAAAGTTCCGCGAGGTGTACGATGTGGTGCTGTACTTGGGTATCATTGATATATTGCAGGACTACAACATGACTAAGAAGATTGAAAATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTGGACCCTACGTTCTACTCTCGTCGTTTCCTGGAGTTTATTCAGAAAGTGTTTCCACCAAATGCAATGGCAGGTTAA 2454 0.4218 MSGPVAIADYSNGGELSCAERTKSRDVLPELDQLSILTDGESEGFSVGQLLLSNGDSYSGFLYGNVSEGHGTYVWCDGCVYEGEWRRGMNNGYGKIKWPSGAVYEGDFSGGYIHGTGRYIRSDKLTYKGRWRLNLKHGLGYQVYPNGDTFEGSWMQGTPEGPGKYTWTNGNVYVGNMKGGIMSGIGTLTCINGDSYEGNWLNGMMHGFGVYTWSDGGCYVGTWTFGLKDGKGTFYPRGSSRLPSVQEIYLSALRKRGLLPDLRKQKQVRDVKVPDNQLSSIVSSDKVAKGNLLNLEQSNRRNVSLERRWSLEVSIEKVIGYDSALGLADSMPESKDKEVDTTIPILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLAKEIKKPGEAIIKGHRSYDLMLCLQLGIRYTVGKITPIPTREVRLSDFGTKASFWMNFPKEGSQLTPTHPSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRLSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLMSYNQSRSVDGLAMLAEEDPLEDEASYPEGLVLVPRGADDNSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISGKQEKQKFREVYDVVLYLGIIDILQDYNMTKKIENAYKSLQFDSLSISAVDPTFYSRRFLEFIQKVFPPNAMAG 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02848 817 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 68 810 IPR023610 -
Spst1g02848 817 PIRSF PIP5K_plant 15 814 IPR017163 GO:0005524|GO:0016308
Spst1g02848 817 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 393 810 IPR002498 GO:0016307|GO:0046488
Spst1g02848 817 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 382 564 IPR027484 -
Spst1g02848 817 Gene3D - 152 201 - -
Spst1g02848 817 Gene3D - 83 135 - -
Spst1g02848 817 Gene3D - 202 243 - -
Spst1g02848 817 Pfam MORN repeat 127 149 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 219 239 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 81 102 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 104 123 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 196 217 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 58 80 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 150 172 IPR003409 -
Spst1g02848 817 Pfam MORN repeat 173 194 IPR003409 -
Spst1g02848 817 SMART PIPK_2 423 811 IPR002498 GO:0016307|GO:0046488
Spst1g02848 817 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 482 808 IPR002498 GO:0016307|GO:0046488
Spst1g02848 817 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 144 238 - -
Spst1g02848 817 SUPERFAMILY SAICAR synthase-like 392 810 - -
Spst1g02848 817 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 175 - -
Spst1g02848 817 Gene3D - 565 810 - -
Spst1g02848 817 CDD PIPKc_AtPIP5K_like 396 809 - -
Spst1g02848 817 FunFam Phosphatidylinositol 4-phosphate 5-kinase 382 564 - -
Spst1g02848 817 SMART morn 125 146 IPR003409 -
Spst1g02848 817 SMART morn 56 77 IPR003409 -
Spst1g02848 817 SMART morn 194 215 IPR003409 -
Spst1g02848 817 SMART morn 217 238 IPR003409 -
Spst1g02848 817 SMART morn 79 100 IPR003409 -
Spst1g02848 817 SMART morn 171 192 IPR003409 -
Spst1g02848 817 SMART morn 148 169 IPR003409 -
Spst1g02848 817 SMART morn 102 123 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02848 Spst-Chr1 37052679 37058579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02848 14 813 Acyl Lipid Metabolism Gene Families AT3G09920 72.660 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02848 K00889 - gmx:100800418 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02848 1 37052679 37058579 Spst1g02848 1 37052679 37058579 ECH
Spst1g02848 1 37052679 37058579 Spst7g01004 7 17627307 17634559 PCT