Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02845 ATGGCCAAGAAGAAAACCACATCTCCAACCAACAATAAGAAAATGAAGACCAAAATGATAATTCACATGCCAAAACATTCTCAACAGCCGAGAAGTTCACCTCCCAAACGTCGCACTGATTTCTCTGTGTTCACTCGCACTCCCTCCTCCTTCTCTAACCCTGCATCTGCAAGACAAGCAATTGGTGATGAAGTTGTTAAATCCCTTCCTCTTGCGTTGGTCGGAAGCAGTTCGATGTGCTGTTTATTATGTCACTCATGCGTAGATGATGATGTTCTTTTAAAGAATTGTCGGGATGTCATGAGTATTTGTGATGGAGGAAAAATGCAGAATATGCTTGGAGGTTGCTCACCAAATTCCTCTTCTGGTGAAGTGAGGTTGTCCAATGTCTCTGCAAGAAGATTGCAGGGGAGGGGAATGACAATGAAACAATTTTCTGAAGATACCCTGGTTAGATGCAGCACTTACGAAGAGGGTAGACCAGTATGTTCATCTGAGTTTTCTGACGCTCCAGTCGTGGAAGTTGATTCAGCTGTCCCAGATGAAAGTCTTGATCATGGTGGCAATAGGGATGCTTCCAATGAAAAAAATGACATTTCCAAGATGTCAGAATCTACAGCTCTTGAATCATCTGTCAGTGACAGCAGTTCTCTTGCGGCAACTCCTGGAAGTGTTGTATGGGCGAGGACAGATTGTCAATTGTGGTGGCCTGCTGAGATCGTGGAAGAAACATCTGCGGTATCCAACCCTGGTAGTGATGGACAAGTTTTAGTGCATTTTTATGGAAATCTTCCCAGTGCCTGGATTGATCCAATGACAGATATTTCAAATTTCGAGGAATCGTTTGAAGCAAGGAGCAATAACCCTTCAGAAGATTTTCAGCAGGCTTTAAAGCAAGCATTACAGAAGAAGGCACAACTTAGTTCTTGCCAATTGTTGACTGCTGATAGATCTCCTCAATCTGATACGCAAGAACGTACATCTGCTTCTAGTGAAGTGTGGAAGGAGCAAGCTTTGAACAATGGATCCAAGGTCTCCCATAAAAGCATCTGTAAAAACACCACATCCTATGATGTTTGCCCTTTGCTCATCAAGAGTTTAGATTCGACCACTTTGAGTCACCACAATCGCAATGATATTTGTAGCAGCACAATCCTCCTAGAGGTTACACATCCAGTGAAATCAGAAAAAAAGCTTCGTAGGTTAAAGATAATGCGGTACCTTGGCCTTGCAGCTCCAATTGGTTCTCCCTTCTGA 1257 0.4312 MAKKKTTSPTNNKKMKTKMIIHMPKHSQQPRSSPPKRRTDFSVFTRTPSSFSNPASARQAIGDEVVKSLPLALVGSSSMCCLLCHSCVDDDVLLKNCRDVMSICDGGKMQNMLGGCSPNSSSGEVRLSNVSARRLQGRGMTMKQFSEDTLVRCSTYEEGRPVCSSEFSDAPVVEVDSAVPDESLDHGGNRDASNEKNDISKMSESTALESSVSDSSSLAATPGSVVWARTDCQLWWPAEIVEETSAVSNPGSDGQVLVHFYGNLPSAWIDPMTDISNFEESFEARSNNPSEDFQQALKQALQKKAQLSSCQLLTADRSPQSDTQERTSASSEVWKEQALNNGSKVSHKSICKNTTSYDVCPLLIKSLDSTTLSHHNRNDICSSTILLEVTHPVKSEKKLRRLKIMRYLGLAAPIGSPF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02845 418 MobiDBLite consensus disorder prediction 1 15 - -
Spst1g02845 418 Pfam PWWP domain 223 302 IPR000313 -
Spst1g02845 418 CDD PWWP 223 301 - -
Spst1g02845 418 Gene3D - 210 313 - -
Spst1g02845 418 MobiDBLite consensus disorder prediction 1 39 - -
Spst1g02845 418 SUPERFAMILY Tudor/PWWP/MBT 221 312 - -
Spst1g02845 418 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 101 319 - -
Spst1g02845 418 MobiDBLite consensus disorder prediction 180 218 - -
Spst1g02845 418 MobiDBLite consensus disorder prediction 199 218 - -
Spst1g02845 418 ProSiteProfiles PWWP domain profile. 222 269 IPR000313 -
Spst1g02845 418 MobiDBLite consensus disorder prediction 314 335 - -
Spst1g02845 418 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02845 Spst-Chr1 37019297 37026151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02845 - - pvu:PHAVU_001G181700g 372.089