Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02781 ATGCACAAGCGCTTGACCGGTGTCAATTACTGGGGAATTGATCCTCTGCATGGTTCGTCATACTTTCCTTACTCTAGCAAGGAATTTCCCCAAATTGCAACACATCCAGATAACACCAGGGCAGCAGAAGACACAGTGTTTCAAGAGGGGAAAGAGAAAAACCCAGCGGCGAAGCACAATGATCCAAACTGCATCATATATGACCTGACTAGAGAAGTTGCTGCTGAATCTACACTACACATTGAGAATCACAACCATAAAAAGGAATTAAACCATGATTTTGATCTGAATAAAACACCTCTACCGAAATCCAAAAGAAGAAAGCATCGCCCCAAAGTCATAAAAGAAAGCAAACCCAGAAGAACTAGCAAGAAAGTCACTGCAGAGTCTGTTCAGTCAAAAGGAAACCCAACTGACAAGAGGAAGCAGAGAAGAAAAGGACTGAAAACAAGTTTTACTCCTCAAACAGAAGTGACAGAAAAAATGACTAAACCATGGATTTCTGAATCTGCCAATACGACGTGTAGAAGGTCTTTAAATTTTGATACAAGAGAACAAGCAAGAGAAAATGCTGGCTATAGAAAAACGAGGAATTTTGACAAAGACACCAGAGTGGTGATTGAAGAAAAGCAGTCCTATCTTTATCAAAAATACAATTTCCTTAGGACCAACCCAAATCTCAACTATAACAGCTGCTCAAGAGCACAACTGAGTCCAAACGACGGTAAATTTTTTAGCAGAGAATATGGAGTACAAGCAGTTGGTTCAAAGAGAAAACAACCTAGTATTGAGCAGGATAATAGCAGCAGCATTAATATGATTGGAGCAGAGTATTATACTGAGCAGGCATATTGCCAGGACTATGTGATTCAGTTTCAAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGGAGAACTTCAAGTACATCCTGTAAATCTTCTGTGACTGCCACAAAAGATGTAGAACCGGCCACATACTTACAAGATGCTAGATTACATTCTCATGTGTCAAGTCCCAACTGCTGGAATTCTGTTTCGGAGTATAGTGCAGCTGGACTCCCAGTCATGATTACAGCTATAGAAAGTGATATTCATGATAAACTTCAATCCCTTGAGTACAACTTGTCTTTAGGGCAGAAGAGACCGACCAAAAGAAGATCAAGAGTTTCTACCAGAATTCATGCCCATCCAGCTCATAATGCAAAGCAGAAATGTAGCTCCAACAGACAAACATTTATGGATGCCAAAAGACCACAGACGTGCATTGATGCTTTAGTTGCAGATATGGGAGCAACACTCACAAAAAAGAAACGAACTAGAAAGAGAAGTACTCCAGTAAATTCAACTTTTTCCTGTACACATGAAAAACAACACAACACATCAGGTATTGCCCCTGAAGACATATGGAAAAAGATACATACTGTGGAGGCTTTAACAGAGCAGTTTAGATGCCTAACCATAAACAGAGAAACTCAAGAGCCTGATAGGACCATTATTCCCCACAAGAAACCATCTGATGCCAAAATTATGCAGATCACAAGAGCTAAAGTTGATATTGATAAGGAGACCGATAGAGTCTGCACGCTTTTACTGGCAGATATTAACAGGCCTGGGATTGATGGAAGTGAGACAGATAAGGCCAAATGGTGGGAAGAAGAACGAAAAGTGTTTCATGGACGAGCAGACTCATTTATTGCAAGGATGCATCTTGTACAAGGAGACAGGCGTTTTTCTATGTGGAAGGGCTCTGTTGTGGATTCTGTGGTAGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCTCTAAGATCAAACAGTGACCACAAAACATGCTACAAGGAAAGCACAAGTTTCACAGTCAATGAACCACAAGAGTGTGTTGTGGAGCCTGAAGAAAATGAAAATCTGAAAAAGAAAATATTTGATCAATCTGGTTGTGAATTGAATTCTATGATAAAGGATGAATCAAACAGCAACATGTTTGAATCAGCTCAAAGACATAAAAGTGAACTTAGTCGAGTGGAGAGTGGAGCAATTAGTGTCGTGACTGAGGAAGGGAAAGAAAATTTATGCCACGGGAGTGTTAGGAAGGAGTTAAATAATGTATTTTCACCCCAATGCTCCCCCATTACATCTCAAATATCAGGAGACCATTTGATTGATCAAAATTCTGGGAGTGTTAGGAAGGAGTTAAATGATGTATTTTCACCCCAATGCTCCCCCATTACATCTCAAATATCAGGAGACCATTCGATTGATCAAAATCCTGAGAAGTTAGGATCATTCGCAGATAGCAATTCAGAAATAGAAGACTTGTCAAGTGCTGCCCAGTACAATATTTATCATAACAGGACTTCATTCAGAGAGCTTTTAGAAATGGCAAGTTCAACCATGATGCACAAAGTTAATAGTCAAAGAAGCAAGTCACCTGAGAACTTTAGATATGCATATGATCATTCCATAGACTGGAATCATGCCAACCTGGTAGAAAACTTGGGTAAATCAGATGTTACTCGAGTCTCGGTAGATGTACCCATCACCAATGAATATACATCTGAAATAATCCCAAATTCAGAAACACTTGCAGTTAACTGTTATAAACCTCTGCAAATACAAGTCCCATCAAATGGATCCTCCAAGGATAAGGGCAAGAATGACAAGATATCTAGCTTTCCAACAGCGTCTTACCCCCAAGCTGCAATTGTTCATTCTCAAGGACAAACTCAAGATCCAATGCAGAAAGAAAGGAAATTAGATTTTGGTGACCCCAACAATGAAATGGGGAATAAAAAAGAAAAGATACATTCTACCCCCATAAGATCAAGAACCAAGAAGCATGGAGAAGAGAAAACACAGGCTCAAGCAGGAAAAAGAGAAAGGTCAGAGAACAACATGGACACTGTGGACTGGGATGCTGTTAGACGAGCAGATGTCAATGAAATTTCCAATATAATCAAAGAAAGGGGCATGAACAACATGCTTGCTGATCGTATTCAGAGTTTCCTGAATCGAATGGTTGACAAGCACAAGGCCATTGATCTTGAGTGGCTCAGAGATGTTCCACCTGACCAGACAAAAGAATTTTTGCTCAGCATACTGGGATTGGGATTGAAAAGTACCGAGTGTGTTCGACTCTTGACACTGCACCATCTTGCTTTTCCGGTGGACACAAATGTTGCAAGAATAGCAGTACGATTGGGATGGGTTCCACTCCAGCCACTGCCGGAGTCACTACAGCTGCATCTTCTAGAATTGTATGAGCTGCATTACCAGCTGATTACATTTGGAAAGGTTTTCTGTACTAAAAACAAACCAAATTGCAATGCATGCCCAATGAGAGGGGAATGCAGACACTTTGCCAGTGCCTTTGCAAGTGCAAGGCTTGCCCTGCCAGGACCAGAGGAAAAGGAAGAAGAACTCACATCTCGAAAAAAAGCAGCTCAGCAGAACCCATCAACAGTTATAAATAAGCTGCCCTTGCCTTTCCCTGAAGATACAATCCAAGAGGAATTTCAACATACCAAAGTGTTCATGCAACTACAAAATGAACCTTTCGTTGAAATGCCAACAACTCCAGAGCCAGAACGCTATCAACCACCACAAAATGATATAGAGGATGCCTTCAAAGAAGAATCATGTGAAATTCCCACAACCAATCTAAACATAGAAGAGTTCACTCTGAACGTACAAAACTATATGCAACAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCATTGGTCGCCCTACATCCAAATGTTGCATCCATTTCTACACCAAAGCTGAAGGATGTGAGCAGGTTGAGAACAGAGCATTATGTTTATGAACTCCCTGATTCACATCCTCTTCTGAATGGGTGGGAACAGCGAGAAACTGATGATCCAGGCAAATACCTCCTAGCAATATGGGCTCCAGGAGAGAAAGCAGATTCCATACAGCCACCAGAAAGAAAATGCAGCTCTCAGAACTATGACCAGCTTTGTAAAGAAGATGAATGTTTTGCATGCAGTAGTCTCTGTGAAGCAAATTCACAGATAGTTCGAGGGACAATACTGATACCATGTCGAACAGCTATGAGGGGAAGCTTTCCACTAAATGGGACATACTTTCAAGTAAATGAGGTTTTCGCTGATAATGACTCCAGTATAAACCCAATTAGTGTTCCCCGCAGCTGGATCTGGAACCTTGACAGGAGAAAAGTGTATTTTGGAACCTCCGTAACATCCATATTTAAAGTGATACCCATTGGTCAAAAGTCCGAACAAAATGGAAGTCTGAATTCAAGGTTGATAGCAACTCTCGGATATGTTTGCGTGCGAGGATTTGACAGGACAAGTAGAGCACCCCGTCCTCTGTTGGCTAGACTTCACTTCCCACGTAGCAAGAAGCCTAAGAAGAAGGACAATACCAAAAAGAAGTCAAAATCAACAAAGAAATCGAAACAAAATAAAGAACAGCCAGAATCGTTGTCGAAACCTAAGAAGGCCGGTAAATCTTCAAACCAAAAAATGTGA 4557 0.4086 MHKRLTGVNYWGIDPLHGSSYFPYSSKEFPQIATHPDNTRAAEDTVFQEGKEKNPAAKHNDPNCIIYDLTREVAAESTLHIENHNHKKELNHDFDLNKTPLPKSKRRKHRPKVIKESKPRRTSKKVTAESVQSKGNPTDKRKQRRKGLKTSFTPQTEVTEKMTKPWISESANTTCRRSLNFDTREQARENAGYRKTRNFDKDTRVVIEEKQSYLYQKYNFLRTNPNLNYNSCSRAQLSPNDGKFFSREYGVQAVGSKRKQPSIEQDNSSSINMIGAEYYTEQAYCQDYVIQFQNVQKKRRSEKGRTSSTSCKSSVTATKDVEPATYLQDARLHSHVSSPNCWNSVSEYSAAGLPVMITAIESDIHDKLQSLEYNLSLGQKRPTKRRSRVSTRIHAHPAHNAKQKCSSNRQTFMDAKRPQTCIDALVADMGATLTKKKRTRKRSTPVNSTFSCTHEKQHNTSGIAPEDIWKKIHTVEALTEQFRCLTINRETQEPDRTIIPHKKPSDAKIMQITRAKVDIDKETDRVCTLLLADINRPGIDGSETDKAKWWEEERKVFHGRADSFIARMHLVQGDRRFSMWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPLRSNSDHKTCYKESTSFTVNEPQECVVEPEENENLKKKIFDQSGCELNSMIKDESNSNMFESAQRHKSELSRVESGAISVVTEEGKENLCHGSVRKELNNVFSPQCSPITSQISGDHLIDQNSGSVRKELNDVFSPQCSPITSQISGDHSIDQNPEKLGSFADSNSEIEDLSSAAQYNIYHNRTSFRELLEMASSTMMHKVNSQRSKSPENFRYAYDHSIDWNHANLVENLGKSDVTRVSVDVPITNEYTSEIIPNSETLAVNCYKPLQIQVPSNGSSKDKGKNDKISSFPTASYPQAAIVHSQGQTQDPMQKERKLDFGDPNNEMGNKKEKIHSTPIRSRTKKHGEEKTQAQAGKRERSENNMDTVDWDAVRRADVNEISNIIKERGMNNMLADRIQSFLNRMVDKHKAIDLEWLRDVPPDQTKEFLLSILGLGLKSTECVRLLTLHHLAFPVDTNVARIAVRLGWVPLQPLPESLQLHLLELYELHYQLITFGKVFCTKNKPNCNACPMRGECRHFASAFASARLALPGPEEKEEELTSRKKAAQQNPSTVINKLPLPFPEDTIQEEFQHTKVFMQLQNEPFVEMPTTPEPERYQPPQNDIEDAFKEESCEIPTTNLNIEEFTLNVQNYMQQNMELQEGEMSKALVALHPNVASISTPKLKDVSRLRTEHYVYELPDSHPLLNGWEQRETDDPGKYLLAIWAPGEKADSIQPPERKCSSQNYDQLCKEDECFACSSLCEANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADNDSSINPISVPRSWIWNLDRRKVYFGTSVTSIFKVIPIGQKSEQNGSLNSRLIATLGYVCVRGFDRTSRAPRPLLARLHFPRSKKPKKKDNTKKKSKSTKKSKQNKEQPESLSKPKKAGKSSNQKM 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02781 1518 MobiDBLite consensus disorder prediction 923 977 - -
Spst1g02781 1518 Coils Coil 1235 1255 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 102 119 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 379 402 - -
Spst1g02781 1518 Pfam RRM in Demeter 1363 1472 IPR028925 -
Spst1g02781 1518 SMART endo3end 963 1111 IPR003265 GO:0006284
Spst1g02781 1518 Pfam Permuted single zf-CXXC unit 1329 1360 IPR028924 -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 1464 1518 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 84 101 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 84 160 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 1470 1493 - -
Spst1g02781 1518 SMART ccc3 1112 1132 IPR003651 GO:0051539
Spst1g02781 1518 Gene3D - 1035 1140 IPR023170 -
Spst1g02781 1518 SUPERFAMILY DNA-glycosylase 559 1134 IPR011257 GO:0003824|GO:0006281
Spst1g02781 1518 MobiDBLite consensus disorder prediction 916 977 - -
Spst1g02781 1518 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 40 1484 IPR044811 GO:0019104|GO:0035514|GO:0080111
Spst1g02781 1518 MobiDBLite consensus disorder prediction 381 399 - -
Spst1g02781 1518 MobiDBLite consensus disorder prediction 435 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02781 Spst-Chr1 36290997 36299742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02781 - - gmx:100787368 1774.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02781 1 36290997 36299742 Spst1g02781 1 36290997 36299742 ECH
Spst1g02781 1 36290997 36299742 Spst7g00935 7 15689101 15690705 PCT