Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02775 ATGCCAACTCTCATCTTCAACATGTTCGCAACTCGTCAGCTTCGGTATATCGTGCTTCTATTTCTGTCCCTCCAAGTTATCACTTTCAGATGCACTTCCATCCCGCAAGAGCTTCAAACGGGCTTCTCGGCGACACCAGAGTCTTCAACGGCGTCGTTTCAGGCAGTTCTCACTGACCCCAGCGGAAACTTCTCTCTGGGCTTCCTCCGCGTGAACCCAAACCAGCTGGCACTAGCCATCGTTCACGTGGCGTCCTCGGAGCCTTTCTGGGTGGCCAACCCAACTCGCACGGCGTCCTGGTCCGACACCACGCGCCTCTTCTTCAACGGCAGTCTCGTGCTGTCGGATCCCGAAACGCGCGTTTCGTGGTCAACCGCCACCAACGGAGACCGCGTGGTGCTCCTCAACACTTCCAACTTGCAGGTCCAAACCAAAGGCTCTCCCCTTTGGGAAAGTTTTGATTTTCCCACAAATACCCTCGTCCAAGACCAGAATTTCACTTCAAAAATGTCTCTGTTATCCTCCAACGGATTTTATTCGATGCGTTTAGGCAACGATTTCATGGGATTATACGATGGGAACGAGTATATATATTGGAAACACACTGCGCTGGAGACAAAAGCGGAAGTGAAGGAAGGGATGGGACCAATTTACGCCCGAGTCAACCCGGAGGGGTACCTCGGGATGTATCAGACGGACGACAAAAAGCCCGTTGATGTTCAAAAGTTCAACAGCTTCCAACAGGCTGTTACAGCGGCGTCGTTTTTGTTCGTGCGGTTGGAAACGGACGGGAATCTGAAAGCTTATTACTGGGACGGTTCCAACTGGCTAACTAACTACCAGGCTATATCTGAAACCTGCGAACTCCCCCGCTCCTGCGGTTTCTACGGTTTGTGCACGCCCGGTGGGTCTGGATGCTCCTGTTTAGATAACCGGATCCGGTTCGAACCCGGTGGGTGCTTCAGTGATGCTAGTGGAGACTTGTGTGGGAAAGAAGGGATTGGTGGGAATGAAAGCGGTTACTGGGTGCTGAGAAGGACCGGCGTGGAGCCACCGCATAAGGAGCTCCTTAGGCAGGAAACGGTGTCGTCTTTAGCGGGGTGCGAGGAATTGTGCCAGAACAACTGTAGCTGTTGGGGAGCGTTGTATAACAACGCCACGGGGTTTTGTTACGTGTTGGACAGTCCGATCCAAACCATGTTGGGTACCGGGGATGCGACAAAAGTGGGGTATTTCAAAGTTAGAAAAGGGGAAGAAGGAAAGAATCGGGTTTGGGTTCGGGTTGTGGTTGTGGTTACGGTTGTGGTAATGGTGGGGGTTATTATTGTTGGGACGGGGTTTTGTGTGAGGAGATGGAAAAGGAGGAGAGGGGTGAAGGAAGAGGAATGGGCCTCGCCCGGCCCGTATAAGAATCTTGGATCGGCGAGTTTTAGGTCGATCGAAATGAGCAGTAATGTGGTGGGGTAA 1467 0.5242 MPTLIFNMFATRQLRYIVLLFLSLQVITFRCTSIPQELQTGFSATPESSTASFQAVLTDPSGNFSLGFLRVNPNQLALAIVHVASSEPFWVANPTRTASWSDTTRLFFNGSLVLSDPETRVSWSTATNGDRVVLLNTSNLQVQTKGSPLWESFDFPTNTLVQDQNFTSKMSLLSSNGFYSMRLGNDFMGLYDGNEYIYWKHTALETKAEVKEGMGPIYARVNPEGYLGMYQTDDKKPVDVQKFNSFQQAVTAASFLFVRLETDGNLKAYYWDGSNWLTNYQAISETCELPRSCGFYGLCTPGGSGCSCLDNRIRFEPGGCFSDASGDLCGKEGIGGNESGYWVLRRTGVEPPHKELLRQETVSSLAGCEELCQNNCSCWGALYNNATGFCYVLDSPIQTMLGTGDATKVGYFKVRKGEEGKNRVWVRVVVVVTVVVMVGVIIVGTGFCVRRWKRRRGVKEEEWASPGPYKNLGSASFRSIEMSSNVVG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02775 488 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 272 IPR036426 -
Spst1g02775 488 Gene3D - 44 155 IPR036426 -
Spst1g02775 488 Pfam S-locus glycoprotein domain 251 310 IPR000858 GO:0048544
Spst1g02775 488 ProSiteProfiles PAN/Apple domain profile. 329 416 IPR003609 -
Spst1g02775 488 Pfam PAN domain 359 399 IPR003609 -
Spst1g02775 488 SMART ntp_6 336 415 IPR003609 -
Spst1g02775 488 ProSiteProfiles Bulb-type lectin domain profile. 42 157 IPR001480 -
Spst1g02775 488 PIRSF SLG 7 429 IPR035446 -
Spst1g02775 488 Pfam D-mannose binding lectin 89 170 IPR001480 -
Spst1g02775 488 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 49 445 - -
Spst1g02775 488 SMART blect_4 48 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02775 Spst-Chr1 36238544 36240010 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02775 - - gmx:100812159 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02775 1 36238544 36240010 Spst1g02775 1 36238544 36240010 ECH