Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02762 ATGTTAGAGAAGTACTCCACCCTGAAGAGAGCTCAGAATATGTCAATCCTTTGTAAAGTTGGGGCTTTGAGATGCCGGCTTCAATGGGATGCTAAATTGCAAGTCTTCTTAACGCATTCATTACATCCCAAATGTATGAAGAATGATGAAGACTGGAAAATGGGTGATATTGTCCACACATTAACAAACAGAAGATGGCTCGAAAAATGTGTATCATATGCTGAGAGTCATGACCAGGCCTTGGTTGGTGACAAGACAATTGCATTTTGGTTGATGGACAAGCTTATAAATACAGACTTGCTTGACTACTATAAATCTTATGGAAAACTTCTCATATGCATTTGCAATCACCTCCTGATGTTGAGTATCAGCTTAGGAAGAAGGCCTAATATAGCATCCCTTAATTCTCTGGCTGATATGTATGACTTCATGGCTTTAGACAGGCCATCTACACCTCGTATAGATCGTGGCATAGCTTTACACAAAATGATTAGGCTTATTACCATGGGACTTGGTGGTGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGTCATCCTGAGTGGATTGATTTTCCAAGGGGTGAACAACTTCTCCCAAGTGGCAAAGTAATTCCAGGGAACAATTACAGTTATGATAAATGCAGGCGTAGATTTGACTTGTTCATGACTTCTGAGCACCAATATATTTCACGGAAAAATGAAGGTGACAAAATTATAGTCTTCGAAAGGGGCAACCTCGTCTTTGTCTTCAATTTTCATTGGAACAACAGCTATTCAGATTACAGAGTTGGCTGCTTAACCCCCGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAATAGGCTCAACCATGCTGCTGAGTACTTCACTTCTGTATGGGACCTCTCTAAACTTGTGTTTGAGTGTGCACCATGCTCTGGCATGGACACCGAAGGATGGTATGATGACCGACCTAGATCCTTTCTTATCTATGCACCTTCTAGAACAGCAGCGGTTTATGCCCTTGCAGATGATGTTGAACCAGCCGTTCCAGATGATGTTGAACCTACCCTTCCAGATGATGTTGAACCTACCCTTCCAGATGATGATGAACCAGAGCCAATTGATACTTTATGA 1137 0.4134 MLEKYSTLKRAQNMSILCKVGALRCRLQWDAKLQVFLTHSLHPKCMKNDEDWKMGDIVHTLTNRRWLEKCVSYAESHDQALVGDKTIAFWLMDKLINTDLLDYYKSYGKLLICICNHLLMLSISLGRRPNIASLNSLADMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGEQLLPSGKVIPGNNYSYDKCRRRFDLFMTSEHQYISRKNEGDKIIVFERGNLVFVFNFHWNNSYSDYRVGCLTPGKYKIVLDSDDALFGGFNRLNHAAEYFTSVWDLSKLVFECAPCSGMDTEGWYDDRPRSFLIYAPSRTAAVYALADDVEPAVPDDVEPTLPDDVEPTLPDDDEPEPIDTL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02762 378 SUPERFAMILY Glycosyl hydrolase domain 225 343 - -
Spst1g02762 378 Gene3D Glycosidases 30 100 - -
Spst1g02762 378 Gene3D - 225 349 IPR013780 -
Spst1g02762 378 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 225 344 - -
Spst1g02762 378 MobiDBLite consensus disorder prediction 349 378 - -
Spst1g02762 378 SUPERFAMILY (Trans)glycosidases 35 220 IPR017853 -
Spst1g02762 378 Pfam Alpha amylase, C-terminal all-beta domain 229 341 IPR006048 GO:0003824|GO:0005975|GO:0043169
Spst1g02762 378 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 32 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02762 Spst-Chr1 36064936 36070411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02762 27 344 Glycoside Hydrolase AT5G03650 57.558 9.48e-126 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02762 K00700 - gmx:100816963 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02762 1 36064936 36070411 Spst1g02762 1 36064936 36070411 ECH