Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02757 ATGGAGGTCTCAGACGACGACGACAAGCACGTTTTCCTTCTTTGCACTAACACTGATCCAATCCAAACAACCGAAAACCTAAACGTTGAGATCATTGTGTCCACCGCCGATATTCTCGATTGGGATATCTCAACGATTCTCAGTTTTCCAACGATTAAAGTTCAGGCACATCGCAATAGGCTCATTGAACAATCTACGTATTTCCGCGGCCTCCTCAGCGGGAGCTTCAGTGAGTCATGCTTGGGCTCTATCGCTATCAATTGGAATGCGAGCGAGTTTTTGGAAATTCTTAAGCATATTTGTGACTGCATTTTGGATATTACGTTGGATAATTTCTTCGCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGACACTTCTCTTGAAGTGTGAGACGTGGCTTTCTGAGGTGCTCTCACCCGAAGGATTTCAATCTACTCAAATAAAAATGGAGGACTTGATCCAAATTTGGAAATTTGGCTCAGATCGTGGTAAAATCAAGCGACTGTATCCTGCACTTATGTACGGGCTACCTAGCAAGAAATTTTGTATGGACCAATACTGTAGATGCTCTGCTATGATGTGGGCAAAGCATAGCAAATCTTTTGGAAAACTTCCATATGACCTGCTGTTATCTTCGGTAAAGCACCCTCATTTGACTGTTGACAGTGAGCTGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACGTGGAAATTTTGGAAAGGCCTAGGAAAGCTGAAGACAACTGCAATGGAATTTTGAAACAAATTCGTGTGGGGCTTTTGCCTTTGTGGTTTGCTCTAGGAAATAGGAACTCTTTTTATTTTAAACAACTGGCTGAGGAAAGCCTGGATTCAATTCTCAGACTACTAAATATTGGTCCTATGGGTTCACTAGATACTTTCGAGTATAGTGACTTACACCATCTGAGGATTAGGTTGACAGAATATTCAAAGGAGGTGGATATCTCCAAGTGTCGAAATTTGCTCATTGAACATGCTGTTGATTGCTTCCGCAAGTCTTTTCCTTCTTTAAGAATATTGAAAGCAGCTTATCTTTTGAACATTGGGACAATTTATTTCCTTCAATTATTGGAGAAATTTTCAATGGTTTGTGAAATTGACTTGACTGTTGATATTACCCCACTGATACCAGCATCAGTTACAATTTTATCCTCTAGTCCTGCTGAGATACAACCGGTGCCAGAGAAGACCTCTACTTGTAAATATAAAGCAATGCACATCATGTCATTTAACGAATTTGGACCTCCTCTTTCAATTGTTACAAAACTCACATTGGAAGGAAGAACTGATGTTAATGATTTGGGTCTCCACTACATCTCCAAATTATGTGTTTCATTGCGTCACCTGAATATTAAAGGATGCATTTCTGTCACCGATATTGGTATATCAGATCTTATATCCACGAGTGAAAAACTTAATTCAATTGTGGTTTGTGAAACTTCATTTGGGATAAATTCAGTTCAAGCCCTTTGCTCAGCTATTTCTGATAGTGGCACCTTCTCCTCTCTACATTCTAGAGATAAGCATTTGAATTCTGTGATGTCTAATTTTGAAACATTGCATATGGGTGGCTGCCGGGGTGTTTCTGAGTCATCTCTGATAGAGCTTATGTCTCAAACGCAAGTTTTGAAGAATTTATGCCTGAGAGGAACTGACCTGATTGACCAGGCGCTGTATAATTTTGTAGGTTCTTCTTTGGAGATGCTTGACATTTCAAATACTAAGATTTCTGGGGCTGCATTAGCTTATGTTATTCAAGGAAATCCAAGTTTAAAGTGTCTGAAAGCAAGAGACTGTCGAAACTTGTTTCCAGGAGACAATTGTGCTGAGAAGAGAGAATCTTGTTTTCCCTCTTGGCATGAACAACTACATGCTGGGTTAGGAAAAATGTGTAGATTGGAAGAGATTGAGTTTGGGTGGGGCTTTTCTTCCTTCTCTCTGAGTTCTCTGGAATCTGCACTGATGTCATTAAAGACCATCAATTTGGGTTTAGGTGGAGTGCTAGGTGAAGATTCTTTGAAACGGTTACCTGCTATCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATAATTGTAATGAACTTTGTTACATCCTTGGAAAACTTGCAAGTATTAGCTCTGCGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCGATGCAAAATCTAAGAAAGTTGAGGCTTGAAAGAGTAACCCCATGGATGACAAATGGTGATTTGGTTGCTCTAACTCAAAACTGCAGAAATTTGGTTGAGCTTTCATTGCTAGGATGTTCTCTTCTTGACCCAGGAACAACCACTGTTTGCCATTTTGATGATTGTTCTGTTGTCGATTGCTACTTAGAATTTTTTGGTGGCTGGCTTGGTCTCTATCCATTTAGAGCTATATATGTGGCTTCCAGCTGTCGTCTCCTGGCCTTGAGAAATTCTGACTGTGGAGAAGTAACAGCTAATGGGGCTTCTGCTCTTCTTGATTGCAAAGCTCTTGAAGATATCCTGCTGCGTCATAATGGTCCTGGGCTTCACAGAAACTTCATTTGTTATGCTGCTTCAGAGATGCCATTGCTTCGAAAGTTGTCACTGGATATATGCGATGCAAGGGAACGTGATTTTGACATTCCAAATTATGCAGACAGATACTGTTTGAGTACCTTAAAAATAGCTAGATGCAAATCTCAAAGATGTGTATTTAATCTCCCAGCTCCTGCCTCAGGGGCTGGTAGTAGATCCGTGCATATGGAGACGCTGGTGCTCGTGTGGAACAGCAGAGATCTCATTAAAACAGTGTCTAACCTCGTAGAGGACATCTTTCTCGGAGAGATTCTCTTAGACAAGACAATTACAGCAACCCCGAGAGTTACGTGGAAAGGCCATGTTCTTGCGAAAAGAGATAAACTAGAAAGAAAACGCGAAACATGCGTAAGAAATGATCCAGGAAATATGACAAACGCTAACTCTCGTTTTGCATTGTGGTGGGAGGAATCTGGGAAGAGATCTGTTTGGCATCTTCACAAACCGATAGTTGCATTGCGCGTTTCCCCAGACGATTGCATGTCTCACCCCGATCGCTGCTCTTTGACCACCCTTCTCGCTAGCTCTCTGGTAGATTAG 3171 0.41 MEVSDDDDKHVFLLCTNTDPIQTTENLNVEIIVSTADILDWDISTILSFPTIKVQAHRNRLIEQSTYFRGLLSGSFSESCLGSIAINWNASEFLEILKHICDCILDITLDNFFALYEGALYFGVETLLLKCETWLSEVLSPEGFQSTQIKMEDLIQIWKFGSDRGKIKRLYPALMYGLPSKKFCMDQYCRCSAMMWAKHSKSFGKLPYDLLLSSVKHPHLTVDSELHLSDALLLWLESNVEILERPRKAEDNCNGILKQIRVGLLPLWFALGNRNSFYFKQLAEESLDSILRLLNIGPMGSLDTFEYSDLHHLRIRLTEYSKEVDISKCRNLLIEHAVDCFRKSFPSLRILKAAYLLNIGTIYFLQLLEKFSMVCEIDLTVDITPLIPASVTILSSSPAEIQPVPEKTSTCKYKAMHIMSFNEFGPPLSIVTKLTLEGRTDVNDLGLHYISKLCVSLRHLNIKGCISVTDIGISDLISTSEKLNSIVVCETSFGINSVQALCSAISDSGTFSSLHSRDKHLNSVMSNFETLHMGGCRGVSESSLIELMSQTQVLKNLCLRGTDLIDQALYNFVGSSLEMLDISNTKISGAALAYVIQGNPSLKCLKARDCRNLFPGDNCAEKRESCFPSWHEQLHAGLGKMCRLEEIEFGWGFSSFSLSSLESALMSLKTINLGLGGVLGEDSLKRLPAICPLLETIILHFQVISDIIVMNFVTSLENLQVLALRYCFGDISMSSFKFPMQNLRKLRLERVTPWMTNGDLVALTQNCRNLVELSLLGCSLLDPGTTTVCHFDDCSVVDCYLEFFGGWLGLYPFRAIYVASSCRLLALRNSDCGEVTANGASALLDCKALEDILLRHNGPGLHRNFICYAASEMPLLRKLSLDICDARERDFDIPNYADRYCLSTLKIARCKSQRCVFNLPAPASGAGSRSVHMETLVLVWNSRDLIKTVSNLVEDIFLGEILLDKTITATPRVTWKGHVLAKRDKLERKRETCVRNDPGNMTNANSRFALWWEESGKRSVWHLHKPIVALRVSPDDCMSHPDRCSLTTLLASSLVD 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02757 1056 Gene3D Potassium Channel Kv1.1; Chain A 26 162 IPR011333 -
Spst1g02757 1056 SUPERFAMILY POZ domain 50 136 IPR011333 -
Spst1g02757 1056 PANTHER UNCHARACTERIZED 287 617 - -
Spst1g02757 1056 SMART LRR_CC_2 454 479 IPR006553 -
Spst1g02757 1056 SMART LRR_CC_2 525 550 IPR006553 -
Spst1g02757 1056 SMART LRR_CC_2 574 598 IPR006553 -
Spst1g02757 1056 SMART LRR_CC_2 767 794 IPR006553 -
Spst1g02757 1056 CDD BTB_POZ_ZBTB_KLHL-like 51 122 - -
Spst1g02757 1056 ProSiteProfiles BTB domain profile. 41 109 IPR000210 GO:0005515
Spst1g02757 1056 Gene3D - 193 291 - -
Spst1g02757 1056 Gene3D Ribonuclease Inhibitor 512 912 IPR032675 -
Spst1g02757 1056 Gene3D Ribonuclease Inhibitor 292 511 IPR032675 -
Spst1g02757 1056 SUPERFAMILY RNI-like 520 749 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02757 - - lja:Lj4g3v1199760.2 993.03