Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02744 ATGGCCTCTCTTATCAACAACGCTAACGGTGCCGTCAACGGTGTTGTTGGGAACGTCGAGAAGCTCATTATCGATACCGACCCTGGGATCGATGATAGCATGGCCATTTTGATGGCTTTTCAAAGTCCTGAGGTGGAGGTTCTGGGTTTGACAACTGTCTTTGGTAATACAACTACCGAACTTTCCACACTCAACGCTTTACTATTGTGTGAGATCGCAGGCCGTGAAAATCTTCCAGTTGCAGAGGGCAGCTCTGAACCATTGAAGGGTGGAACGCCTCGTGTTGCTGATTTTGTTCATGGTGAAGATGGACTAGGGAACACATTCCTACCCCCACCCAAAGGTAAGAAAATTGAGCTGAGTGCTTGTGAGTTTCTGGTGGAGAAGGTTTCTGAATATCCTGGTGAAGTATCTGTGCTAGCACTTGGACCACTAACAAATGTGGCTTTGGCAATCAAAAGAGATTCTTCGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTTCATTCTTTGCCTTGGGGAATGTGAACCCTGCTGCAGAAGCAAATATCTATGGAGACCCAGAAGCTGCAGATATTGTGTTTACCTGTGGAGCAAATATTGTCGTTGTTGGAATAAACATTACAACCCAAGTCCAATTTACAGATGCTGATCTTCTTCAACTGAAGGAATCTAAGGGAAAGTATGCTCCTTTCTTGAGTGACATATGCAAATTCTATAGGGACTGGCATGTAAAATCTGACTGTGTCCATGGCATTTTCCTCCACGATCCCGTAAGTTTTGTGGCACTTGTGCGTCCAGATCTTTTTACGTTCAAGGAGGGGGTAGTGAGGGTAGAGACACAAGGCATCTGTGTTGGGCATACGCTTTTGGACCAAGGATTGAAAAATTGGCCTTCGAGCAACCCATGGACGGGTTATTCTCCTGTTTCAGTTGCTTGGACTGTGAATGTCGAGGGAATTCTTGATTATATCAGGGAGCTGGTGATGAAACCCTGA 1005 0.4517 MASLINNANGAVNGVVGNVEKLIIDTDPGIDDSMAILMAFQSPEVEVLGLTTVFGNTTTELSTLNALLLCEIAGRENLPVAEGSSEPLKGGTPRVADFVHGEDGLGNTFLPPPKGKKIELSACEFLVEKVSEYPGEVSVLALGPLTNVALAIKRDSSFASKVKRIVILGGSFFALGNVNPAAEANIYGDPEAADIVFTCGANIVVVGINITTQVQFTDADLLQLKESKGKYAPFLSDICKFYRDWHVKSDCVHGIFLHDPVSFVALVRPDLFTFKEGVVRVETQGICVGHTLLDQGLKNWPSSNPWTGYSPVSVAWTVNVEGILDYIRELVMKP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02744 334 CDD nuc_hydro_CaPnhB 21 325 - -
Spst1g02744 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 20 333 IPR023186 -
Spst1g02744 334 Gene3D - 16 334 IPR036452 GO:0016799
Spst1g02744 334 FunFam Probable uridine nucleosidase 1 15 334 - -
Spst1g02744 334 SUPERFAMILY Nucleoside hydrolase 20 331 IPR036452 GO:0016799
Spst1g02744 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 322 IPR001910 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02744 Spst-Chr1 35899437 35901996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02744 K01240 - gmx:100818908 593.964