Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02742 ATGGCGTTCCCAATCCTCATACACACTCTTTGCCTCCTTTTGTTCCCACAAGCCCTACTTTCTCAAGACAACAACTTCGTTCGTCAGCCAGCTGGTCAACTCACCATCACGCCCCACCGACGCTCCCACTCCGATCCCCAACAGGTGCACATTTCATTGGTGGGGAAGGACAAGATGAGGGTGTCGTGGATAACGGAAGACAAGCACGCAGAATCTGTGGTCGAGTACGGCACAGAGGCAGGGAAATATAACGCAAAAGCAACCGGTGACCATACCTCGTACCAGTATTTTTTCTACAGTTCCGGCAACATTCACAACGTTGTTATCGGGCCTTTGAGACCAGCCACCGCTTACTTCTACAGGTGCGGCGGCTCCGGCCCAGAGTTTTCGTTCAAGACACCTCCACCCAAGTTCCCAATTGAGTTTGTCATCGTTGGGGACTTGGGACAAACTGAATGGACTGCATCAACCTTGAAACATGTAGAAAGTAGCGACTACGACGTGTTGTTGTTGCCAGGAGATCTATCCTACGCGGACTCCCAACAACCCTTATGGGACTCCTTTGGTCGTTTAGTGGAACCATATGCTAGTAAAAGGCCATGGATGGTCACTGAAGGCAACCACGAGATTGAAACTTTCCCCGTTATTTACCCACAAGGTTTCCAAGCCTACAATGCTCGTTGGCTCATGCCATTCCAACACAGTGCTTCCACCTCAAACCTCTATTACTCCTTTGAGGTTGTCGGTACCCACGTCATCATGCTTGGTTCCTACACTGACTTTGATGCCCAATCACAACAATACACCTGGCTTCGGTCTGATCTCGCCAACATTGACAGGGTCAAGACACCTTGGGTGATCATGTTGTTGCATGCACCTTGGTATAACACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAAGAATTGCTTTATAATGCTCCTGTTGACCTAGTTTTTGCGGGTCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAATAAGTTTGACTCGTGTGGACCGATGTACGTGACGATTGGAGATGGCGGAAATCGGGAGGGACTTGCGTTAACGTTTAAGAACCCTACGAGCCCGCTCTCGTTGTATCGAGAGCCAAGCTTTGGACATGGAAGGTTGAGAATAGTAAATGAAACACATGCACATTGGTCATGGCACCGAAACAACGACGCTGATGCAGTTGTAGCTGATGATGTTTGGATAGAGAGTTTAAGCAGCTCCAAAGCATGTTCGAAACAGCAAGATGCTCCTAAAGAAGAGCTATAA 1305 0.4835 MAFPILIHTLCLLLFPQALLSQDNNFVRQPAGQLTITPHRRSHSDPQQVHISLVGKDKMRVSWITEDKHAESVVEYGTEAGKYNAKATGDHTSYQYFFYSSGNIHNVVIGPLRPATAYFYRCGGSGPEFSFKTPPPKFPIEFVIVGDLGQTEWTASTLKHVESSDYDVLLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIETFPVIYPQGFQAYNARWLMPFQHSASTSNLYYSFEVVGTHVIMLGSYTDFDAQSQQYTWLRSDLANIDRVKTPWVIMLLHAPWYNTNEAHQGEGESMRQAMEELLYNAPVDLVFAGHVHAYERFTRIYDNKFDSCGPMYVTIGDGGNREGLALTFKNPTSPLSLYREPSFGHGRLRIVNETHAHWSWHRNNDADAVVADDVWIESLSSSKACSKQQDAPKEEL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02742 434 PANTHER ACID PHOSPHATASE RELATED 12 419 IPR039331 GO:0003993
Spst1g02742 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 135 IPR008963 GO:0003993|GO:0046872
Spst1g02742 434 SUPERFAMILY Metallo-dependent phosphatases 139 413 IPR029052 -
Spst1g02742 434 Pfam Iron/zinc purple acid phosphatase-like protein C 347 409 IPR025733 -
Spst1g02742 434 CDD MPP_PAPs 136 401 IPR041792 -
Spst1g02742 434 Pfam Calcineurin-like phosphoesterase 142 332 IPR004843 GO:0016787
Spst1g02742 434 Pfam Purple acid Phosphatase, N-terminal domain 46 133 IPR015914 GO:0003993|GO:0046872
Spst1g02742 434 Gene3D - 45 136 - -
Spst1g02742 434 Gene3D - 137 425 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02742 Spst-Chr1 35877395 35880370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02742 40 432 Miscellaneous Gene Families AT2G03450 27.021 2.12e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02742 K22390 - gmx:100819446 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02742 1 35877395 35880370 Spst1g02742 1 35877395 35880370 ECH