Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02739 ATGGCTAGAATGCCTTTAGAACCTCTTATAGTGGGGAGAGTCATAGGAGAGGTTCTTGACTCTTTTACCACTAGCATAAAAATGACTGTGAGTTATAACAAAAAGCAAGTTTACAATGGCCATGAGCTTTTCCCTTCATCTATCAACACCAAACCCAAGGTTGAGATTGATGGTGGTGATATGAGGTCCTTTTTCACACTGATTATGACAGACCCTGATGTTCCAGGCCCTAGTGACCCTTATTTGAGAGAACACTTGCACTGGATAGTGACAGACATTCCAGGCACAACAGATGCTACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCAAAGCCTAATATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGGCAGTGTGTTACTCCACCTACTTCAAGGGATCACTTCAACACACGCCATTTCGCAGCACAAAATGAACTTGGCCTCCCTGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG 522 0.4464 MARMPLEPLIVGRVIGEVLDSFTTSIKMTVSYNKKQVYNGHELFPSSINTKPKVEIDGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDHFNTRHFAAQNELGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02739 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Spst1g02739 173 Pfam Phosphatidylethanolamine-binding protein 48 162 IPR008914 -
Spst1g02739 173 CDD PEBP_euk 27 164 IPR035810 -
Spst1g02739 173 FunFam Terminal flower 1 1 173 - -
Spst1g02739 173 Gene3D - 2 173 IPR036610 -
Spst1g02739 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Spst1g02739 173 Coils Coil 166 173 - -
Spst1g02739 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02739 Spst-Chr1 35845913 35847239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02739 K06910 - pvu:PHAVU_001G189200g 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02739 1 35845913 35847239 Spst1g02739 1 35845913 35847239 ECH