Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02737 ATGGAGCACCTTCCTGTTGAAGTGATTGGGAACATATTGTCTCTTCTTGGTTCTGCCCGGGATGTTGTGGTTGCTTCTGCAACTTGCAAGAAATGGAGGGAAGCACGGCGCAGTCACCTCCAGAGTCTTTCATTCAATATCTGTGATTGTCGTCTCTATCATGACTATACCTCTTCTAGGTTGGAAATAATCATCACTCAGACGATTTTTCAAACCAAGGCACTGCAGTTTTTGACCATCTTCATGGATGATGAGCGTGAATTCTCTGCTGCCCCCGTCATTGCTTGGTTTATGTATACTAGGGATTCCTTGCGCGGATTGCACTACAATGTGAGGACTACCCCTAGTTTCAACATCATTGAGAAATGCAGCAGACATAGATTGGAGGTGTTGACATTGACTCGCAATTCCATCATGGGTGTTGAGCCAGGTTATTTGAAGTTTCCTTGCTTGAAGTCGCTTTCGTTGAGTTTCATTAGCATCTCGGCATTGGATTTGATCCTTTTGTTGTCTTCTTGTCCAAAGCTTGAAACCTTTGCTATGGTTAGTCCAGAGATTGCAATGTCAGATTCTCAGGTTTCTTTGGAGCTTACCAGTCCTTCTTTGAGGAATTTCTACCTTGAATTGTTTAGTTGGGATAAGTTTATAGTCGAGGTAGATTTGCTTGAGAAACTTCATTTGAAAGATTGTACCTTTGAGGTTTTTGAGCTGGTTGGAAAGGGGACACTCAAAGCGTTGAAAATTGATGATGTGAGTATTATCCATTTTGATATTGGGGATGCTACAGAGAACCTTGAGATTATAGATGTCTGTAACTTCACAATCATGTGGCCAAAATTTTACCATATGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACTATTTCTGTTTGTTTTCCTCAATTGAAGCAGTTGTCGTTAAGTTATGATTTAAGAGATGGAATGTTTCATTATAGCTTGCAGGGTTTGTCTTGTTTGATGAATGTGGTGGTGTTAGAACTTGGATGGACTGTAATCAGTGATCTTTTCTCAGTATGGGTGGCTGGACTTTTGGAAGGATGTCCCAGGTTGAAAAAATTGGTCATTTATGGTTATGTTTCAGAGGTAAAAACACATGAAGAGTGTCAAATTCTCGCCAGATTCTCTGAATTCATTATTCAACTTGGAAGAAAATATGGACATGTAAAATTTGAGTTTGAATATGAGTAG 1260 0.3976 MEHLPVEVIGNILSLLGSARDVVVASATCKKWREARRSHLQSLSFNICDCRLYHDYTSSRLEIIITQTIFQTKALQFLTIFMDDEREFSAAPVIAWFMYTRDSLRGLHYNVRTTPSFNIIEKCSRHRLEVLTLTRNSIMGVEPGYLKFPCLKSLSLSFISISALDLILLLSSCPKLETFAMVSPEIAMSDSQVSLELTSPSLRNFYLELFSWDKFIVEVDLLEKLHLKDCTFEVFELVGKGTLKALKIDDVSIIHFDIGDATENLEIIDVCNFTIMWPKFYHMISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLKQLSLSYDLRDGMFHYSLQGLSCLMNVVVLELGWTVISDLFSVWVAGLLEGCPRLKKLVIYGYVSEVKTHEECQILARFSEFIIQLGRKYGHVKFEFEYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02737 419 Gene3D Ribonuclease Inhibitor 276 401 IPR032675 -
Spst1g02737 419 SUPERFAMILY RNI-like 113 382 - -
Spst1g02737 419 SUPERFAMILY F-box domain 1 63 IPR036047 GO:0005515
Spst1g02737 419 Pfam F-box-like 2 35 IPR001810 GO:0005515
Spst1g02737 419 Gene3D - 2 39 - -
Spst1g02737 419 Gene3D Ribonuclease Inhibitor 40 256 IPR032675 -
Spst1g02737 419 PANTHER F-BOX PROTEIN-LIKE 2 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02737 Spst-Chr1 35820579 35821838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02737 - - gmx:100792331 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02737 1 35820579 35821838 Spst1g02737 1 35820579 35821838 ECH