Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02734 ATGGCTCACCAATCTTCTGCTGAATCTGATGACCGGATTCCTTCAAAGTCATTGGAGCTAAACAGTCCCCATCCGTGTAAAGATATCATAAACATGGAGCAGAAGCAGCAACAACAAGAGCCGTTGAGCAAAGTTAACCATGATGGTATGGATAGAGAAAAGGGAGTTACAAAGCAAGACCCATCTGCTTCAAAATCCCTCCTTTGCAACGAGGAGAAAATGGCATTGCAAGAGGCTGCAACAATGGATGGTGTTGGTGAAGAAAGTGGTGTTGCAGAGGCTTTAGAAGAGGATAGTGGACGCGAGAGGCTGAAGCGGCATAGAGTTGAAGTGGCTGGGAGGGTTTGGATTCCTGATATGTGGGGTCAGGAGGAGCTGTTGAAGGACTGGATAGATTGCACTGCATTTGATGCCCCTTTGGTTCCAAGCAGAATCTCCACTGCACGAGAGGCTTTGGTTGAAGAGTGTACAAGAGCAAATGCTGCTGGACTAAGAATAGAGAACAGGTGTTAG 513 0.4698 MAHQSSAESDDRIPSKSLELNSPHPCKDIINMEQKQQQQEPLSKVNHDGMDREKGVTKQDPSASKSLLCNEEKMALQEAATMDGVGEESGVAEALEEDSGRERLKRHRVEVAGRVWIPDMWGQEELLKDWIDCTAFDAPLVPSRISTAREALVEECTRANAAGLRIENRC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02734 170 CDD BIC1_CID 100 156 - -
Spst1g02734 170 MobiDBLite consensus disorder prediction 1 66 - -
Spst1g02734 170 MobiDBLite consensus disorder prediction 1 17 - -
Spst1g02734 170 MobiDBLite consensus disorder prediction 45 59 - -
Spst1g02734 170 PANTHER PROTEIN BIC1 30 170 IPR040374 GO:0009785
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02734 Spst-Chr1 35796900 35797412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02734 - - gmx:100779351 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02734 1 35796900 35797412 Spst1g02734 1 35796900 35797412 ECH