LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02719	ATGACGGAAGTGCTTCAGTTGCCTTCATCGTCAAGCTGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAAGTTCCCTTATTAACGCTCCCACTGTGGAAGAAGGGGTGCTGCCACAGTCCCCTTTGGATTTGGAAGCTGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGAAAGAAAGGGAAAGAGAAAGGGATCAGCTTTCAATTTTGACCCTGTTGATTGCTACGTTTAGGAAGTCTCTGATTGGGTGCAGCACTACAGCTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGGCACGTGGCTCATGTCACCTTCGATCGCTTCCATGGTTTTCTTGGTTTGCCTGTTGAGTTTGAACCCGAAGTTCCCAGGAGGCCCCCCAGCGCTAGCACAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTTTCTTTTGACGCCAGAGGAAATAGTGTACCTACAATACTTTTGTTAATGCAAAGACATTTGTATGCACGTGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATCAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGGGTAGTACCAGATGGCATTGATGTGCACTGCTTGGCAGGTCTCATAAAGGCTTGGTTCAGAGAACTACCTACTGGGGTATTGGACCCTCTCTCACCAGAGCAGGTGATGCAATCCCAGTCGGAAGAAGAATGTGCTCAGCTTGTGAGACTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCGATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATGTTGCAATGGTTTTCGCACCAAACATGACCCAAATGGCAGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTGGTCGTCAAGACACTTAGAGAAAGAGAGGAGTCCATTGTAAAATCAAATCCTGTTCCCAACCTTGATTCTTTTGACGATGATGGGCACCATAGTAATTCAGAAATGCTTCACAAGCATGGCGGTGAAAGTGGAAATGATTGTAGTGATGAAGATGAGGGTGCAGTATTTGTCACTGCAGAGCCGGCTGAACAAAGCCCTAGTCATCTTACTGAAGATGGATGTGAAACTGAGTCCAAAAGTTTGCCAACATCTACTGAAAATTTTATTTCTAGTGGAAATAGGTTGTTGGTTGACAATTGTCCTTGCAATCTTGTGTCTCAAATTTGCTCCTTGGCAATTGGGCTTCAAGACTGTGGCCTCACTACTGGGCAGACAAAGGGGTATCAAGCAAACTTTTGCAGGAGCAAAAGCCTTCAGTTGAGTACTCATGATGTAGACAAATGTTCCAGAAAGGTGATTGAGCTTCCCGTAGCAGGAGCTACAGAGAAGAACAGGGGAACTGCAATTATTGGGCGTCTAAATTCAAGAACGGAGTTGGCTGAAGCTTGGCGTTGA	1512	0.453	MTEVLQLPSSSSCGGLTPNDGSHPSSLINAPTVEEGVLPQSPLDLEAEEEEEEEEEEKERERERDQLSILTLLIATFRKSLIGCSTTASPSSSSSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTNVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNVAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPVPNLDSFDDDGHHSNSEMLHKHGGESGNDCSDEDEGAVFVTAEPAEQSPSHLTEDGCETESKSLPTSTENFISSGNRLLVDNCPCNLVSQICSLAIGLQDCGLTTGQTKGYQANFCRSKSLQLSTHDVDKCSRKVIELPVAGATEKNRGTAIIGRLNSRTELAEAWR	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g02719	503	MobiDBLite	consensus disorder prediction	335	403	-	-
	Spst1g02719	503	SMART	RhoGAP_3	161	324	IPR000198	GO:0007165
	Spst1g02719	503	Gene3D	CRIB domain	96	131	IPR036936	-
	Spst1g02719	503	MobiDBLite	consensus disorder prediction	342	365	-	-
	Spst1g02719	503	Gene3D	Rho GTPase activation protein	135	333	IPR008936	-
	Spst1g02719	503	MobiDBLite	consensus disorder prediction	1	64	-	-
	Spst1g02719	503	MobiDBLite	consensus disorder prediction	1	29	-	-
	Spst1g02719	503	MobiDBLite	consensus disorder prediction	44	59	-	-
	Spst1g02719	503	Coils	Coil	43	70	-	-
	Spst1g02719	503	CDD	CRIB	100	140	-	-
	Spst1g02719	503	ProSiteProfiles	CRIB domain profile.	102	115	IPR000095	-
	Spst1g02719	503	Pfam	RhoGAP domain	164	298	IPR000198	GO:0007165
	Spst1g02719	503	Pfam	P21-Rho-binding domain	101	127	IPR000095	-
	Spst1g02719	503	FunFam	Rho GTPase-activating protein 5	132	325	-	-
	Spst1g02719	503	PANTHER	MKIAA1688 PROTEIN	1	379	IPR044785	GO:0005096
	Spst1g02719	503	SMART	PBD_5	102	136	IPR000095	-
	Spst1g02719	503	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	147	332	IPR000198	GO:0007165
	Spst1g02719	503	SUPERFAMILY	GTPase activation domain, GAP	141	320	IPR008936	-
	Spst1g02719	503	CDD	RhoGAP	164	319	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g02719	Spst-Chr1	35699034	35702373	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02719	-		-	gmx:100783118	833.558

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g02719	1	35699034	35702373	Spst1g02719	1	35699034	35702373	ECH