Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02715 ATGTTCTACAATGGAGTATACCATCTTTTCTACCAATACAACCCGAAAGGTGCAGTGTGGGGTAACATCGTGTGGGCCCACTCAGTGTCGATGGATCTCATAAACTGGAAGGCCCTTAACCACGCGCTTTACCCATCGAAGCCCTTCGACAAATTCGGATGTTGGTCGGGTTCAGTGACAATTGTCCCAGGCAAGGGGCCCATAATCCTCTACACTGGAGTCATAGACACGAACCAAACACAAGTTCAATGTTACGCTGTACCCGAAGACCTGAAGGACCCGTACCTCCGCAAATGGGTAAAACCCGACAAATTCAACCCATTTTTGGTCGCCGACAAAGGCGTTAACGGTAGTGCTTTTAGGGACCCCACAACGGCGTGGCGGAGCAAAGATGGACACTGGAAAATATTGGTGGGTAGTCGAAGGGAGGATAGAGGAATGGCTTATTTGTATAGAAGCAAAGACTTTAGGAAGTGGGTTCGGGCCAAACACCCGCTCCATTCTAGTAGCAACACGGGTATGTGGGAGTGCCCGGATTTTTACCCTGTTTCGCTTAAAGACAAATTAGGGTTGGACGCATCCGTGGATGGAAGTCATGTGAAACACGTTTTGAAAAATAGTCTTGATGTGACTAGGTATGAGTATTATACTGTGGGAACCTATATTCAGGAGATGGATAAGTATGTTCCCGATAAAACTTCGGAAGATGGTTGGCGTGGATTGAGGTATGATTATGGTAATTTTTATGCTTCTAAGTCGTTTTTTGATCCTAGCAAAAATAGGAGAGTCATATGGGGTTGGGCAAATGAGTCTGATTCTGCACAGGATGATACTCGTAAAGGATGGGCAGGGATTCAGGCGATTCCTCGAACTGTGTGGCTGGATTCATCTGGGAGACAATTGGTGCAATGGCCTGTTGAAGAATTAAATAATCTTAGAGGGAAAGAAATAAGCATGAAAAATCAGAAGCTTCAGAAGGGAGACATTGTTGAAGTAAAAGGAATCACTGCTGCACAGGCAGATGTGGAAGTTACATTTTCAATTTCAAGTTTGGACAAAGCTGAGAAATATGATCCTAAGTGGGTATATGCACAAGATGTTTGTGCTCAAAAGGGATCAAATGTTCAAGGTGGTGTTGGACCATTTGGGCTTTTGACTCTGGCTTCTCAAGATCTGGTGGAGTTTACTCCTGTGTTTTTCAGAATTTTCAAAGATTCAAAAAAGTATGTGGCTCTCATGTGCTCTGATGCAAGAAGTTCCTCTTTGAAGAGTAAGTTGTACAAGCCATCATTTGGTGGCTTTATAGACTTGGATTTGACAACTGATAAGAAAATTTCTCTAAGGAGTTTGGTACGTGCAATGATCAATTTGATTGATCACTCAGTAGTGGAAAGTTTTGGAGCAGGAGGAAAGACAAACATTTTATCTCGAGTTTATCCAGAGCTAGCAGTGACAAATCAAGCTCATCTTTTTGTGTTCAACAATGGCACTGAACCAATCACTGTGGAAAACCTCAAAGCATGGAGCATGAAATCTGCTCATATACACTGA 1551 0.432 MFYNGVYHLFYQYNPKGAVWGNIVWAHSVSMDLINWKALNHALYPSKPFDKFGCWSGSVTIVPGKGPIILYTGVIDTNQTQVQCYAVPEDLKDPYLRKWVKPDKFNPFLVADKGVNGSAFRDPTTAWRSKDGHWKILVGSRREDRGMAYLYRSKDFRKWVRAKHPLHSSSNTGMWECPDFYPVSLKDKLGLDASVDGSHVKHVLKNSLDVTRYEYYTVGTYIQEMDKYVPDKTSEDGWRGLRYDYGNFYASKSFFDPSKNRRVIWGWANESDSAQDDTRKGWAGIQAIPRTVWLDSSGRQLVQWPVEELNNLRGKEISMKNQKLQKGDIVEVKGITAAQADVEVTFSISSLDKAEKYDPKWVYAQDVCAQKGSNVQGGVGPFGLLTLASQDLVEFTPVFFRIFKDSKKYVALMCSDARSSSLKSKLYKPSFGGFIDLDLTTDKKISLRSLVRAMINLIDHSVVESFGAGGKTNILSRVYPELAVTNQAHLFVFNNGTEPITVENLKAWSMKSAHIH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02715 516 CDD GH32_Fruct1-like 1 294 - -
Spst1g02715 516 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 514 - -
Spst1g02715 516 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Spst1g02715 516 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 1 317 - -
Spst1g02715 516 Pfam Glycosyl hydrolases family 32 C terminal 308 509 IPR013189 -
Spst1g02715 516 SMART glyco_32 1 470 IPR001362 GO:0004553|GO:0005975
Spst1g02715 516 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 513 IPR013320 -
Spst1g02715 516 Gene3D - 319 510 - -
Spst1g02715 516 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
Spst1g02715 516 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Spst1g02715 516 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 317 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02715 Spst-Chr1 35658082 35660026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02715 1 511 Glycoside Hydrolase AT3G52600 64.504 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02715 K01193 - gmx:100777418 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02715 1 35658082 35660026 Spst1g02715 1 35658082 35660026 ECH