Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02711 ATGATCATGAGATGCTATACGAGAAAGGGTGGGTCAAAATTCGGAGCAAGTCCCATCCCAGCTCTGCACTTTCCCCCCGTCGCAGAAAATCTCTGTTCTGTGGTTTGCAATTGGAGACAGATAAGTTCCCTTCTGGAGCATGGCGATGACAATACACGCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGCGCAATATACAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGCTTATTCTTCGGAGGTGGATCCACTCAATTTCTAATGAGCCGTGATGGTGGGGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCCGTTGGGAGCATAGCCATTCCTATAATCCTCAAGCACGCTCATATGATTGAGACAGGCGCAATGCTCATCGAGCTTGTATCGTTTTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAACCTTGATGATGATTGGTAA 519 0.4509 MIMRCYTRKGGSKFGASPIPALHFPPVAENLCSVVCNWRQISSLLEHGDDNTRLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02711 172 PANTHER LEPTIN RECEPTOR-RELATED 53 171 IPR007262 -
Spst1g02711 172 Pfam Vacuolar protein sorting 55 55 166 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02711 Spst-Chr1 35602452 35604721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02711 50 163 EF-hand Containing Proteins AT1G32410 56.140 1.29e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02711 - - pvu:PHAVU_001G192100g 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02711 1 35602452 35604721 Spst1g02711 1 35602452 35604721 ECH