Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02706 ATGTCTCAGACGAAGAAATTGACGCCGAATCTGGATCAGCAGACCACGAAGGTGCTGAATCTCACGGTGCTCCAACGAATCGATCCATTCATTGACGAGATTCTCTTCACCGCCGCCCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTCGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAACCACGGTTTCAGTTTATCGTAATGAATCGACGAAATACAGATAACCTAGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAACCCGTACCTATTATATCGGAATGCGGCTCAAGAAGTTAATGGTATATGGTTTTACAATTCAGAGGAATGTGAGGAAGTTGCAAATCTTTTTAACAGGATACTTAATTTGTACCCAAAGGCATCTCCAACTACAGGAACACCAACTAACAGAAGTGGGTTTGAGGACCATCAGCCAGTGTCAATTATACCAGAAAACCCTGTAGAATCATCTTTAGCTACTGCTTCTGCAACTGATGCTGTTGAAGATCCTGTATTTACAAACTTTTTCAGTACATTGAAGGCTACTGGAAATTATGCTTCCACTGTAGAAAATGTTAGACAACCTTCTACGACTGTCACTCCTATTGCTCCTAGTGGTTTATTTTCTCCTGCATCTACTGTGCAAATACCCGTCTCTCATTCAACTTCATCTATATCAGGCTTCCATATTGATTCTCTTGAAACAGTCAAAAGTGGCAGTCAAGTCATTAATCTTGTTAAGCCTTCTACTTTTTTCGCATCAACTTCTTCGTCTTCACTGTTAGCTCCACCTATTTCTTCACCTGTGCTGCCTAGTGCAGTTGTTAATCATTCCTTGAATCTGCCACGACCATATGGCACTCCGGTACTTCAACCCTTCCCACCCCCTAATCCTCCTCTCTCTCTTACCCCTGTTTCAAGCTCTAGTCCAAATAGACCTGTAATAGGCAGGGACAGCGTTCGCCATGCACTTTTATCATTGGTTCAGGATGATCAATTCATTGATATGATGTTCCAGGCATTACTGAAGTGTATTGTAGAAATAGCCGTATGTTTCTGCACAATGATAAGTGTTTCGATGTCAGTGTCGCCTTATTACCCTTTGTTGTATGTTCTTTGTGTTTTAAAATACAATCATGGTTCTGTCGGTGTCTGTGCATCAAGTCGGACAAGTCCTCTCTATGGACAAATGAAGATATGTATGTACAATCCCATGTTTAACATGCTGCTAACAACAATCTTTAATGGGATGAAATCACAACAAAACGAAATTGCAAGAACTAAGGAGGTGCAGGAAGAAACAGCGTTCATTGATTATGTTATGGGCTGTGGGTATGAAGACCAACCCAAATACCCAGTTCTGCATGCCCCTCCTCCTATATTGGGCCTGGCCTGTTGCAGCCTAAGCCCACGATTGGGTTGA 1458 0.4211 MSQTKKLTPNLDQQTTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKNPYLLYRNAAQEVNGIWFYNSEECEEVANLFNRILNLYPKASPTTGTPTNRSGFEDHQPVSIIPENPVESSLATASATDAVEDPVFTNFFSTLKATGNYASTVENVRQPSTTVTPIAPSGLFSPASTVQIPVSHSTSSISGFHIDSLETVKSGSQVINLVKPSTFFASTSSSSLLAPPISSPVLPSAVVNHSLNLPRPYGTPVLQPFPPPNPPLSLTPVSSSSPNRPVIGRDSVRHALLSLVQDDQFIDMMFQALLKCIVEIAVCFCTMISVSMSVSPYYPLLYVLCVLKYNHGSVGVCASSRTSPLYGQMKICMYNPMFNMLLTTIFNGMKSQQNEIARTKEVQEETAFIDYVMGCGYEDQPKYPVLHAPPPILGLACCSLSPRLG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02706 485 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Spst1g02706 485 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Spst1g02706 485 SUPERFAMILY PH domain-like 19 138 - -
Spst1g02706 485 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 355 IPR010334 GO:0000290|GO:0008047|GO:0043085
Spst1g02706 485 CDD EVH1-like_Dcp1 19 133 - -
Spst1g02706 485 Gene3D - 7 135 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02706 Spst-Chr1 35526030 35532148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02706 K12611 - gmx:100780081 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02706 1 35526030 35532148 Spst1g02706 1 35526030 35532148 ECH