Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02691 ATGGCCCTAGCACGTGGATCCATCCTCACTCGATCAGTCTGGTCCTCGAATCTCGAATCGGAGTTCGAGTTAATTCGATCCGTCATCGACACCTTCCCGCTCATCTCGATGGACACCGAGTTCCCCGGCGTCGTTGTGCGCCCCGACACTGGCGACCCCTCCTTCTACCACCGCGAACCAGCCGCACATTATGCCGTGCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGTCTCACTCTATCTGATCAGGTCGGGAATCTACCAACTCTCGGCACCTCCAACGCCTTCGTATGGGAATTCAATTTCCGAGATTTTGACGTTGCTCGTGACGCCCACGCTCACGATTCCATCGAGTTACTGCGGCGCCAGGGCATCGACTTCGAGAAGAATCGGGAGTTTGGGATCGATTCGGTCCGGTTCGCCGAGCTCATGATGTCCTCCGGTCTGGTCTGCGACGACGTCGTTAGCTGGGTGACGTTTCATAGCGCCTATGATTTCGGATATCTGGTGAAATTGTTGACACAGCGCACCTTGCCCGATGGATTGGCAGAATTTCTCCGTCTGGTGAGGGTGTTTTTCGGTGATAGAGTCTTTGATGTGAAACATTTGATGAGGTTCTGCTCAAACCTTCATGGTGGTTTGGATCGAGTGTGCCAATCACTGAATGTGGAACGAGTTGTAGGGAAAAGCCACCAGGCCGGTTCAGATAGTTTGCTAACCTTGCATGCGTTTCAGAACATTCGTGAGGTGTATTTTGGCAAGGCTGATGGACTTGTTCAATATGCAGGTGTCTTGTATGGATTGGAGATTTTCTAA 825 0.5224 MALARGSILTRSVWSSNLESEFELIRSVIDTFPLISMDTEFPGVVVRPDTGDPSFYHREPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVARDAHAHDSIELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDVVSWVTFHSAYDFGYLVKLLTQRTLPDGLAEFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEIF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02691 274 Gene3D - 3 273 IPR036397 GO:0003676
Spst1g02691 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 272 IPR039637 GO:0004535|GO:0030014
Spst1g02691 274 SUPERFAMILY Ribonuclease H-like 11 271 IPR012337 -
Spst1g02691 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Spst1g02691 274 FunFam Putative CCR4-associated factor 1 7 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02691 Spst-Chr1 35365166 35365990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02691 K12581 - gmx:100790027 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02691 1 35365166 35365990 Spst1g02691 1 35365166 35365990 ECH