Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02680 ATGGAAGATACCAAATCCAGGTTCAAGAGGATTTGCGTCTTTTGTGGCAGCAGTTCAGGCAAAAAACCTACTTACCAGGAAGCTGCTGTTCAACTTGGCAAGGAACTGGTGGAAAGAAGGATTGATTTGGTGTATGGAGGTGGTAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGATTATCCCAACAAGTCTTATGCCAAGAGAGATAACTGGTGATCCTATTGGGGAAGTGAGAGCCGTATCTAATATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCCTTTATTGCCCTTCCAGGAGGATATGGAACTCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGTGGGGCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCAGTTGATGAAGGCTTTATATCCCCTAAGGCTCGTCGCATTATTGTGTCAGCGCCCACAGCCCAACAACTGATGATAGAACTAGAGGAGCATGTTCCTGAGCAAGACGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTGAATTACGCGACTGAATCAGGAGTAGCCATGTGA 642 0.4798 MEDTKSRFKRICVFCGSSSGKKPTYQEAAVQLGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGIIPTSLMPREITGDPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAQQLMIELEEHVPEQDEFASKLVWEERLNYATESGVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02680 213 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
Spst1g02680 213 Gene3D - 1 185 - -
Spst1g02680 213 FunFam CASP-like protein 1 185 - -
Spst1g02680 213 NCBIfam Rossman fold protein, TIGR00730 family 9 184 IPR005269 GO:0009691|GO:0016787
Spst1g02680 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 206 - -
Spst1g02680 213 SUPERFAMILY MCP/YpsA-like 7 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02680 Spst-Chr1 35255286 35258882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02680 K22522 - gmx:100792663 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02680 1 35255286 35258882 Spst1g02680 1 35255286 35258882 ECH
Spst1g02680 1 35255286 35258882 Spst7g00137 7 1031047 1034714 PCT