Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02674 ATGTCGGTGAAGGAGTGCCACCACCACAAGGGAAAGAAGCACAAGGTCTTGAAACGCATATTCTGGGGCATAGTGATCTTCGCGTTCATCGTGTTGGTGACAGTTCTCATAATCTGGGCGATTCTGAAGCCTTCAAAGCCAACCTTCATCCTCCAAGACGTCACCGTATTCGGGTTCAACGCCACCATCCCGAACCTCCTAACCTCAAGCTTTCAGGTGACGCTGTCCTCGCGCAACCCCAACGACAATATCGGCATCTACTACGACCGTCTCAGCACCTACGTCACCTACAGGAACCAGCAAGTCACCTACCGGACCTCAATCCCTCCCGCCTACCAAGGTCACAAGGAAGAAGACGTGTGGTCCCCATTCGTCTATGGCAACGACGTCCCCGTCGCACCCTACAACTTCCTTGGCCTCAGTCAAGACCAGTCTAACGGCAACGTCCTCGTCATCGTTAAAATTGACGGTAAAGTCCGATGGAAGGTCGGTGCCTTCGTCTCCGGCCACTACAACCTCTACGTAAGGTGCCCTGCGTTTATAACCTTTGGCCCTCGAAGCACCGGGATCGCTCTTAGCAATAACGCCGTTAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGGTATGTTCACGTTCCTTCCACATGGAATGATGGTGGTGATTGTCTTTTCCCAGTCCCCTTTACCTAACTTGCCTACTACTGATGTGGTGAAGAATGTTCCTTCCTGTTTGTTGTTGCGGGCAATCAAGATCAAACTTTGCCCCAGTCAATACAAATCCGCTGTTGATTGA 795 0.5182 MSVKECHHHKGKKHKVLKRIFWGIVIFAFIVLVTVLIIWAILKPSKPTFILQDVTVFGFNATIPNLLTSSFQVTLSSRNPNDNIGIYYDRLSTYVTYRNQQVTYRTSIPPAYQGHKEEDVWSPFVYGNDVPVAPYNFLGLSQDQSNGNVLVIVKIDGKVRWKVGAFVSGHYNLYVRCPAFITFGPRSTGIALSNNAVKYQLVQRCTVGGMFTFLPHGMMVVIVFSQSPLPNLPTTDVVKNVPSCLLLRAIKIKLCPSQYKSAVD 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02674 264 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
Spst1g02674 264 PANTHER OS05G0367900 PROTEIN 18 196 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02674 Spst-Chr1 35166257 35169575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02674 - - gmx:100795832 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02674 1 35166257 35169575 Spst1g02674 1 35166257 35169575 ECH
Spst1g02674 1 35166257 35169575 Spst7g00150 7 1107949 1108581 PCT