Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02672 ATGGATCCATCTCATGATGGAAAAGGATCTCAAAAAGAATCATTCTCCAAAGGGTCTTCTTCCCACATGTATGATGATGGTCCACCACCGATGGCGGCACCGCCAAACACGATGTATTACTCACCAGGAATGGGGTACCCACCGGGAGTCCATGCCCCTCCTCCACACCAGGGTTACCCTCCAGGCTATGCCCCATACCCTAATGACTACCCTCCACAACAGGCATACCATTATCCCGCAGGGCCCTACTTCAGCAATCCACCCACCTATCACAATGATGGTGGAGCCAGAGCCTTTGTTCGTGGATTCATATTGTGTTCCTGTCTAATATTCACGGGCCTCTTCTTCGCCACCCTTGTCCTAGCGCTACTGTTGCATCCCCATCTACCCGTTTACACCGTTAATTCCCTCTCTGTAACCAATTTCAACATCTCCACAACGCTAACCGCGGATTGGAACACTACCTTCTCCATTCAAAACATCAACGACAAGCTCAACGGTTTTTTCTCCGACTTAAAGGTGGATTTGTTGCACAAAGACGACATGATAGCGGTGAGTTACGTATCCGATTTTGCGATGGACAAGAACGAGGTTAAGAGATTCGATGTGAAGCCGTCGTCGAATGGGTTCTTATTTCCGAGTTGGGACTTGGATAACATGGCGAAGGAGAAAGAGAGTGGCTCCATCACGTTCGTTCTGAGGATTACTTCCATGGTGGCGTTCAAGTCTAGCACAATGTCCACGAGAAGCGCGTTGGTTCTAGCACTTTGCGACGACTTGAAGGTTGTCTTTCAGAACAACACCGGTAACGGCGCGTTGGACAATGGAGGAAAGCCCATCAGTTGCCAACTTTATATATGA 861 0.489 MDPSHDGKGSQKESFSKGSSSHMYDDGPPPMAAPPNTMYYSPGMGYPPGVHAPPPHQGYPPGYAPYPNDYPPQQAYHYPAGPYFSNPPTYHNDGGARAFVRGFILCSCLIFTGLFFATLVLALLLHPHLPVYTVNSLSVTNFNISTTLTADWNTTFSIQNINDKLNGFFSDLKVDLLHKDDMIAVSYVSDFAMDKNEVKRFDVKPSSNGFLFPSWDLDNMAKEKESGSITFVLRITSMVAFKSSTMSTRSALVLALCDDLKVVFQNNTGNGALDNGGKPISCQLYI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02672 286 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 54 263 - -
Spst1g02672 286 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02672 Spst-Chr1 35156267 35157127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02672 - - gmx:100808758 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02672 1 35156267 35157127 Spst7g00154 7 1142400 1143242 PCT