Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02665 ATGTATCTGATTAAAAAATCTTTGCTTCCCGACACAGCTGTACTTCTCTTTTTCCTAAAACTTGCCGTATCACACAGCACATTTGTGGCAAGGTTGTTCTGCATCCCATATCTAGTCATGGATATTGAGTCAACAATGGAAGCAAACAAGGGAGGGTTTTTTGCTCATTGGGGGAACTGCCTCAAGGCTATGCCTAGGAACATCAAGTTTATGGTTGTCAACTTCACAAGGAGCATAGCACAGATTGGAAAAGATGACCCCAGAAGAGTAATTCACTCATTAAAAGTGGCAATTGCTCTTACGTTGGTATCCTTGGTTTACTACTCGAGGCCTCTTTATGATGGCTTCGGAGTTGCTGGAATGTGGGCTGTTTTGACAGTGGTGGTAGTATTTGAATTCAGCGTAGGTGCAACCCTATGCAAAGGTTTAAATAGAGGATTTGCTACATTATTAGCTGGTGCTTTAGGTGTTGGAGGGCAACATTTAGCTACTGCTTTTGGAGAAAGAGAAAAACCTATTGTCCTTGGGATCCTCGTCTTCATTCTAGCCGCAGGGGCTACTTTTTTCAGGTTTTTTCCAAAGATCAAAGCAAGATATGACTATGGGATGGTGATATTTATATTGACATTCTGTTTGGTTACTGTCTCCGGATATCGAGTGGAGCAACTCTTTGAGCTTGCCCATCAGAGACTTTCAACAATTTTAATAGGGGCAACAGCTTGCATGGTCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTTCAACATAGAAAAGCTGGCAAATTACCTAGAAGGATTTGAAGTCGAATATTTTCATTGCTCAGAAGATAAAGAAAAATGTGAGAAGTCAGTTCTTGAAGGATACAAAAGTGTTCTCAATTCCAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCGGGACATGGCCGTTTTGGTCTTCGTCATCCTTGGAAGCAGTACTTGAAGATTGGAGCACTTACTCGGGGATGTGCTTACAAGATAGAAACCCTTAACAACTACCTTAACCCGGAAATCCAAGCATCTTTGGAATTCAAGTGTAAAGTTCAAGAACCATGCACAAAGATGAGTTCAGAGTCCAACAAGGCGTTGAAGGCAATATCTTCCTCAATCAAAACAATGACACACCCATCAGTTGCCAAAAGCCACATAGAAAATTCAAAAACTGCAGTTGAAGACCTCAAATTTGCTCTCGAAACCGTTTCTTTGGAAGATACTGAACTCCTACCCATAATACCAGTTGCCACAGTTGCATCAATACTTGAAGAAATCACCAAGTCAGTGGAGAAAATATACGAGTCTGTTTCCGAGCTTTCTCACTTAGCCCAGTTCAAGAATGCTGTAGAACCCAATGTCTCACCAGAGAAGCCACACCTTCTTCATCGAGGTATCATAAAACCTGTTGCGGATATTGAAAACACCGTCGACCACGTTGAAGTTATGATCCCAGACATAACCACAGACTCACCGGAAAAAGAAAAGACGCCAACAAAACCCTCCGAACATATATCTGAAGCACACACGTTGAAAGAGATTGTGCAAGTCTTACCCTTGGGACCTGCAACATTCACAAGTCCATATGTTGCTATTGCCTGA 1650 0.4212 MYLIKKSLLPDTAVLLFFLKLAVSHSTFVARLFCIPYLVMDIESTMEANKGGFFAHWGNCLKAMPRNIKFMVVNFTRSIAQIGKDDPRRVIHSLKVAIALTLVSLVYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLCKGLNRGFATLLAGALGVGGQHLATAFGEREKPIVLGILVFILAAGATFFRFFPKIKARYDYGMVIFILTFCLVTVSGYRVEQLFELAHQRLSTILIGATACMVISIFICPVWAGEDLHKLVAFNIEKLANYLEGFEVEYFHCSEDKEKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGRFGLRHPWKQYLKIGALTRGCAYKIETLNNYLNPEIQASLEFKCKVQEPCTKMSSESNKALKAISSSIKTMTHPSVAKSHIENSKTAVEDLKFALETVSLEDTELLPIIPVATVASILEEITKSVEKIYESVSELSHLAQFKNAVEPNVSPEKPHLLHRGIIKPVADIENTVDHVEVMIPDITTDSPEKEKTPTKPSEHISEAHTLKEIVQVLPLGPATFTSPYVAIA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02665 549 Pfam Aluminium activated malate transporter 81 457 IPR020966 GO:0015743
Spst1g02665 549 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 67 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02665 Spst-Chr1 35086152 35089371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02665 40 502 Miscellaneous Gene Families AT3G11680 56.780 5.80e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02665 K25841 - gmx:100170704 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02665 1 35086152 35089371 Spst1g02665 1 35086152 35089371 ECH