Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02657 ATGGCGACGATGGATCCGTTGATGACGCCGCTGGGGCAAATGCTATTGGAGGAGATCACTCCGGTGGTGATGCTCCTTTCAACTCCTTCCGTCGAAAAAGCTTCCCTCAAGAACGGCCTCTCCTTCCTCCAGACGCTAACGCCGTTCTGCTCCTTCAACAACATCGACGTGCCTGTTAGGACTGCCAGTGACCAACCCTATCGCCTTCACAAGTTCAAATTGCGCTTGTTTTACGCTTCCGATGTTAGGAGGCCCGATTTGCAGGTAGCTAAAGAGCAATTGAAGCAAGTTATCACGGAGGCAGGGGAGAAAGAGTTTTCTGAGTCGGGTTCAGATTTGCCGGAAATTAATCATGAACTTTCTTCTAGTTCTGAATACCAAAATACACCATCTTTGTTTCGGTTTCTCAATAAAGAGCTTGTTCGAGTGGCTTCCTTTTCAGATCATGAAGCTTTTGACCATCCTGTGATATGTCTTCTAGCTGTCTCTTCTAAGGATGAGCAACCTATTAACAAATTTGTTGACTTTTTTAATACCAACAAGCTTCCTTCCCTTCTTAATGATGGCTCTATGGATCCAAAAATTTCAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGTCCTGCAGACAGTGCAAGTAAGATATTGACAGAAATGAGGAATACATTTGGTACAAGTGATTGTTCGTTGCTTTGTATTAATTCCTCCCTCGATGCTCCAATCAAACATCAAGATAATCCTTGGGCTTCTTACATAACTGATGCCTCACCTACTCCCAGTCAAGATCTTGGTTGCTTTCTTAACATTGATGATATCAATGAGATCAAAGATCTATTGCAAAATTTATCATCTAAGCACATCATTCCCAATATGGAGCAAAAAATTCGTATACTCAACCAACAGGTTTCTGCAACACGGAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCTCAATGGTCCTACGTATAACTTTAATTCCATTGAATCCCAGATTCGACTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGTCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGGTATGCTGGTGTTCAGGAAATGATGGGACTTACTTACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAACGCTTTTAACACATATTTAAAGCTTGGATCATTGGGTCAGCTAAATGCAACACGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCAGCTACTGTTTACTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAGACCCTCCATGTTACGCAAATATGGATTCCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATTAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAGAGGAACTTCTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTTTCTTGGGATGTATGACGTGGCTGTAAAGCATATGACGGAAATCTTGGCCTGTAGTCACCAGTCCAAGACCACACAGGAATTATTCCTAGGAGACTTTCTTCAAATTGTGGAGAAAACTGGACGGACATTTGAGGTAACAAAACTTCAATTACCTGTAATCAACATCTCTACCCTCAGGGTCATCTTCGAAGATAACCGAACATTTGCATCATCTTCAGCTACCTTATTGAAAAGTGTGAAACACCTTATCACAAAGGACTTTACATGGTTGGTAGGAACTATGGATCATGCTAACACTAGAGAAGGCTTGTGGCATTCTTTGGAGGAAGAAATGCTACCATCATTCTCTGCTGCCAAGACTAATTGGTTGGAGTTACAGTCAAAGCTTATCCTAAAAAAACATAGTCAAAATGTTTGCGTTGCAGGCGAAGCTGTGAAGGTGACTATTGAATTTAGAAATCCTCTGCAAATCTCAATTCCCATATCTAATGTTACACTCGTATGCAAGTGTTCTTCCAGTACTGAAGTTAGATCAAATGAAAATGAGTCAAGTATGGAGAAAAATAATGACGTTGACCACTTTATGGTGTCTGAGGTTAATTTCTTAATAGGGGGTGGTGAAACAACCATGATTGAACTATCAGTTACTCCCAGGGAAGAGGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCAGGGACAATTGTTGGCTTTTACAACTTTGAGTTGGATCACCCAAAGAAGAATATTATAAAAAGAAGGAAAACAAAGCCCCTGCCAAATGAGAAATTTAAATTTGTGGTGATTAAGAGCATACCCAAACTTCAGGGTTCGATCCACCCCTTACCTGAAAAGGCATATGCTGGAGATTTACGACAACTTGTTTTGGAATTGAGGAATCCATCAGTGTTTCCTGTCAAGAATCTGAAGATGAAGATAAGTCATCCTAGGTTCGTTATAATTGGGAAGCAGGAATATATGAATTCAGATTTTCCTGGGTGTTTAAGAAAGAAGACAGATTCATTACAAAGTGATAAGGATGCTAATAGTAATATCATGTCTGACACAGTCTTTTTGTTTCCAGAGGGTACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATATCTCTTTACATGAGCATATATTATGAGATGGGAGATGTATCCAGTGTCATCAAATATCGTACTCTTCGCTTACATTACAACGTGCAGGTATTACCGTCATTGGATGTCTCATTTCAAATCAGTCCTTTTCGATTAAGATTAGAAGAATTTCTTGTTCGATTGGATGTTGTAAACAAGACTAGCTCAGAAAGTTTCCGAGTTTGTCAGTTATCGTCAGTTGGTCACCAATGGGAAATCTCATTGGTTCAAGCTCCGGATACTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAATATCATGTTTCTTTACACTAAAGAAATCAAGGAGTTTTTCGACATTGGAGAATGACATGCCTACAATGCCTGTTAGAAGTGATGTAAGATTGGTACCCCAAAGCAGTGATGATTTAGTTTATGATATAAACAGTACACCTTTGATCAATTTCCACCATTATGAAAGATTGCAGCAGGAAGTTTCATTCGAGGGTGACTTAAATACTGTAGATTTTGTATTAATCTCTCGGCCATTTAAGAGTAACGACAATCCTGGTTTTTCCAATCCTTCGTTTGTTATGTCTCATCATGCGTGTCACTTCAGTACTGCTAGCACGGGCCCTATTTCATGGCTAGTGGATGGACCTCAAATCTTTCATCATGACTTCTCTGCATCCTTCTGTGAAATAAGTATGAAGATGCATATTCACAATTCATCTGGTGCCACTGCTTTTGTACGCATTGACACCTTTAATTCAGCTGGTAATGTTGGACATATGAATAGTGTAAATGTGGTTCAATCAGCAACTACCGATAGCCAAGCCGGGTGGCATGACATCACCCCGGTAAATGAACACAAAGTCACATCAAATGCTGTTGAAACCCAACCAGGAAAGGCACTGTCATTGGAAAGTGCTTCCTCGTATATTTGGTCTGGATCAAGCTCAACCAATCTTCACATTGACGCAATGTCATCGGCTGAAATTCCTCTTCAGATCAGTGTATTCTCTCCAGGGACATTTGACCTGTCAAATTATGTTTTGAACTGGAAACTTCCTTCCAATGGACAGGGAGATAGTGATGAAACGAGGCAGCATTCAGGCAAGTGCCAGGGGTACAAATACTATCTTACCGTGCTCCAGTCCACTTGA 3909 0.4006 MATMDPLMTPLGQMLLEEITPVVMLLSTPSVEKASLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVRRPDLQVAKEQLKQVITEAGEKEFSESGSDLPEINHELSSSSEYQNTPSLFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINKFVDFFNTNKLPSLLNDGSMDPKISKHYLLVHDNQDGPADSASKILTEMRNTFGTSDCSLLCINSSLDAPIKHQDNPWASYITDASPTPSQDLGCFLNIDDINEIKDLLQNLSSKHIIPNMEQKIRILNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYNFNSIESQIRLLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSRPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTSWSYINDHVHFHIGQWYAFLGMYDVAVKHMTEILACSHQSKTTQELFLGDFLQIVEKTGRTFEVTKLQLPVINISTLRVIFEDNRTFASSSATLLKSVKHLITKDFTWLVGTMDHANTREGLWHSLEEEMLPSFSAAKTNWLELQSKLILKKHSQNVCVAGEAVKVTIEFRNPLQISIPISNVTLVCKCSSSTEVRSNENESSMEKNNDVDHFMVSEVNFLIGGGETTMIELSVTPREEGTLEILGVRWKLSGTIVGFYNFELDHPKKNIIKRRKTKPLPNEKFKFVVIKSIPKLQGSIHPLPEKAYAGDLRQLVLELRNPSVFPVKNLKMKISHPRFVIIGKQEYMNSDFPGCLRKKTDSLQSDKDANSNIMSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLYMSIYYEMGDVSSVIKYRTLRLHYNVQVLPSLDVSFQISPFRLRLEEFLVRLDVVNKTSSESFRVCQLSSVGHQWEISLVQAPDTIFPSQSLMAGQAISCFFTLKKSRSFSTLENDMPTMPVRSDVRLVPQSSDDLVYDINSTPLINFHHYERLQQEVSFEGDLNTVDFVLISRPFKSNDNPGFSNPSFVMSHHACHFSTASTGPISWLVDGPQIFHHDFSASFCEISMKMHIHNSSGATAFVRIDTFNSAGNVGHMNSVNVVQSATTDSQAGWHDITPVNEHKVTSNAVETQPGKALSLESASSYIWSGSSSTNLHIDAMSSAEIPLQISVFSPGTFDLSNYVLNWKLPSNGQGDSDETRQHSGKCQGYKYYLTVLQST 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02657 1302 PANTHER TRANSPORT PROTEIN TRAPP 8 1301 IPR024420 -
Spst1g02657 1302 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 170 524 IPR024420 -
Spst1g02657 1302 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 666 843 IPR013935 -
Spst1g02657 1302 Gene3D Tetratricopeptide repeat domain 330 560 IPR011990 GO:0005515
Spst1g02657 1302 SUPERFAMILY TPR-like 435 556 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02657 K20305 - gmx:100809666 2276.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02657 1 34969693 34984185 Spst1g02657 1 34969693 34984185 ECH