Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02637 ATGGATTCCTCTTCCATCTATGGCGTCTCCTACTTCTTCATTCTCCTCCTTCTACCACTCCATTCCCTCTCCGCATTCCCTCACAACTCTTCAACTACTCCCCAGATTAACTCCAACTCCATCCTCGTCGCGCTTCTAGATTCCCATTACACCGAACTTGCCGAGCTCGTTGAGAAAGCACTTCTTCTCCAGCAGCTAGAAGACGCCGTCGGCAACCACAATATCACCATCTTCGCACCGCGAAACCAGGCCCTAGAACGTGACCTGGACCCCGAGTTCAAGCGCTTCCTCCTCGAGCCTCGCAATCTCCGCTCCCTTCAGACACTCCTAATGTCCCACATTCTCCCCACGCGAATCTCCTCTCACCACTGGCCCGCCGCCGACCGCCGCCACGCCACGCTCGGGAACCACCACCACCTGCATTTGGCCACCAAACCCTCCGGCCAGAAGACTGTGGACGCCGCCGAGATACTCCGCGCCGACGACGTCGTCCGCCCCGACGGTGTCATCCACGGCATCGAGCGCCTCATCGTCCCCCGATCCGTCCAGGAGGACTTCAATCGCCGCCGCAACCTCGCCGCCATCTCCGCCGTCCTCCCGGAAGCCGCGCCGGAGGTCGATCCCCGCACCCATCGACTAAAGAAGCCTGCCCCCGTTCCCGCCGGCGCGCCTCCCGTGCTCCCAATCTACGACGCCATGGCTCCGGGACCATCCCTCGCGCCGGCGCCGGCGCCGGGACCTGGAGGCCCGAAGCATCACTTCAACGGTGAGCGGCAGGTGAAGGACTTCATCCACACGCTCTTGCATTACGGAGGGTACAACGAAATGGCGGATATTCTAGTTAACCTAACGTCTCTCGCCACCGAAATGGGAAGGCTCATTTCGGAGGGTTACGTTCTGACCGTTTTGGCACCAAACGATGAAGCGATGGCGAAGTTAACGACGGATCAGTTGAGCGAACCGGGCGCACCGGAGCAGATTATGTACTATCACATTATTCCTGAGTACCAAACCGAAGAGAGTATGTACAATGCCGTTAGAAGGTTCGGTAAGGTCCGGTACGATACCCTGCGGTTGCCCCATAAGGTTCTCGCTCAGGAGTCCGACGGTTCCGTTAAATTCGGTCACGGCGATTCCTCCGCTTACTTGTTCGATCCTGATATTTTCACCGATGGAAGGATCTCCGTCCAGGGAATTGACGGCGTTCTTATCCCTCCGGAGGAAGAGGAAGAACGCACTCACCGCACCACTCCACTTGTCAAGGTTGCCGCTAAACCAAGGAGAGGGAAGTTGATGGAAATGGCCTGTAGCATGCTTGGAACTTTTGGACAAGTCTGCCAATGA 1344 0.5781 MDSSSIYGVSYFFILLLLPLHSLSAFPHNSSTTPQINSNSILVALLDSHYTELAELVEKALLLQQLEDAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSHHWPAADRRHATLGNHHHLHLATKPSGQKTVDAAEILRADDVVRPDGVIHGIERLIVPRSVQEDFNRRRNLAAISAVLPEAAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPKHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLISEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVLAQESDGSVKFGHGDSSAYLFDPDIFTDGRISVQGIDGVLIPPEEEEERTHRTTPLVKVAAKPRRGKLMEMACSMLGTFGQVCQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02637 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 447 IPR044654 -
Spst1g02637 447 Gene3D FAS1 domain 41 179 IPR036378 -
Spst1g02637 447 SMART fasc_3 301 406 IPR000782 -
Spst1g02637 447 SMART fasc_3 76 180 IPR000782 -
Spst1g02637 447 ProSiteProfiles FAS1/BIgH3 domain profile. 37 177 IPR000782 -
Spst1g02637 447 Pfam Fasciclin domain 49 179 IPR000782 -
Spst1g02637 447 Pfam Fasciclin domain 295 405 IPR000782 -
Spst1g02637 447 Gene3D FAS1 domain 279 406 IPR036378 -
Spst1g02637 447 FunFam Fasciclin-like arabinogalactan protein 16 255 406 - -
Spst1g02637 447 SUPERFAMILY FAS1 domain 239 407 IPR036378 -
Spst1g02637 447 ProSiteProfiles FAS1/BIgH3 domain profile. 260 403 IPR000782 -
Spst1g02637 447 SUPERFAMILY FAS1 domain 29 180 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02637 Spst-Chr1 34792034 34794439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02637 - - gmx:100818575 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02637 1 34792034 34794439 Spst1g02637 1 34792034 34794439 ECH