Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02623 ATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTTAATGAGTATTTGGAACCTTATGGACTATTTTTTCCACTTGATCCAGGTCCTGGTGCCAGCATTGGAGGCATGTGTGCTACACGTTGCTCTGGTTCGTTAGCTGTGAGGTATGGAACTATGCGTGACAATGTCATCAGTCTCAAGGTGGTCCTTGCCAATGGAGACGTTGTGAAGACTGCATCACGTGCCAGGAAGAGTGCTGCAGGGTATGATTTGACCCGCTTGATGATTGGAAGTGAAGGAACACTTGGTGTTATAACAGAAGTAACCCTACGGCTTCAGAAAATTCCTCAGTATTCAGTGGTTGCAATGTGCAATTTCCGTTCTGTGAAGGATGCGGCAGATGTTGCTATTGCCACCATGATGTCTGGTATACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTCCAAGTGAAAGCTATCAATATTGCTAATGGGAAAAATTTGCCTGAATATCCAACCTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGAGAGCAAACACAAATTGTTCGGAAACTTGTTTCTGAGCACAATGGCTCAGATTTTGTATTTGCAGAAGAACCTGAAGCAAAAAACGAACTTTGGAAGGCAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGCTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATTGCACATGCTGGAGATGGTAATTTTCACACAGTTATTCTATTTGATCCTAACCAAGAAGAAGAGCGGCGGGAGGCGGAGAGACTCAACCATTTTATGGTTCATGCTGCTTTGTCATTAGAAGGAACTTGTACTGGTGAGCACGGTGTTGGCACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTGGAAGCATTGAGGACAATGAAAAAAATAAAAGCAGTCCTAGATCCTAATAATATCATGAATCCAGGAAAGCTCATTCCTCCCCATAGTTACACTGTTCGAGTTTACAGGTGGGAAATTTTGGATTTGTATCACTATGCACAACTGATGTGTAATTACGCAAAATGTCAAAGAAACAAAGTGAATGCACGTGTCTTCTCCGCTGAAGGAGTCTTACCACATGAGATTGAATAA 1212 0.4241 MDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFRSVKDAADVAIATMMSGIQVSRVELLDEVQVKAINIANGKNLPEYPTLMFEFIGTEAYAREQTQIVRKLVSEHNGSDFVFAEEPEAKNELWKARKEALWACFAMEPNLEAMISDVCVPLSHLADLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPNQEEERREAERLNHFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKAVLDPNNIMNPGKLIPPHSYTVRVYRWEILDLYHYAQLMCNYAKCQRNKVNARVFSAEGVLPHEIE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02623 403 Gene3D - 230 311 - -
Spst1g02623 403 Pfam FAD linked oxidases, C-terminal domain 110 351 IPR004113 GO:0003824|GO:0050660
Spst1g02623 403 SUPERFAMILY FAD-linked oxidases, C-terminal domain 114 354 IPR016164 GO:0003824|GO:0050660
Spst1g02623 403 FunFam D-lactate dehydrogenase mitochondrial 312 352 - -
Spst1g02623 403 Gene3D - 1 131 IPR016169 -
Spst1g02623 403 Pfam FAD binding domain 2 73 IPR006094 GO:0050660
Spst1g02623 403 FunFam probable D-lactate dehydrogenase, mitochondrial 1 109 - -
Spst1g02623 403 ProSiteProfiles PCMH-type FAD-binding domain profile. 1 110 IPR016166 GO:0071949
Spst1g02623 403 FunFam D-lactate dehydrogenase mitochondrial 230 311 - -
Spst1g02623 403 SUPERFAMILY FAD-binding/transporter-associated domain-like 2 111 IPR036318 GO:0050660
Spst1g02623 403 PANTHER D-LACTATE DEHYDROGENASE 1 355 - -
Spst1g02623 403 Gene3D - 312 352 IPR016171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02623 Spst-Chr1 34683646 34700921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02623 K00102 - gmx:100803612 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02623 1 34683646 34700921 Spst1g02623 1 34683646 34700921 ECH