Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02620 ATGGTGAAAACAAAGCAGAAGCGCACAGGAAAAGTTCCTGGTAAAAAAAGTGGTACTTCTTCACATGACCTTGTTGATTCTCGAAACTTTGACAATCAACATGAGGATAGTGATTGGGTTATAGTGAAAAAGCAGAGAGTAACCATTCTGGTACCTGCTGCGCCTCTCAAGGAGAGATCGGCAAACCAAGGACCAAATCACACACAACTTATGCCTCCTGAATTGGCAAGTAACCACGTGCGGCTTCCCATCGAGACATCTACTATACATCCTTCAGGTAATGAACATGAAAAGACCACTTTATTGACTGGCCAAAAAGAGACACGCACCGAGAGAAGAGCTCCTCCGATCTTACCTAAACCAACTGTGGTCAATCCACCATCTGTAGATCAGAGAACAGAATCAGATAATCCACGTCAAATGAATAGTTTGAAGTCACATAAACAACATGGAATTTCTGATACATCAAAAGTTATTAAGCAGCCCAGAATACTACTTCCACCAAGAAGGCCCTCCAACCTGGAAACTTTGAATAAAAACTTGAGAGCATCAAATCTGGAGAGGAAGCTTGAAAGAGCTGGTGGACTGAGCAAGTGGCTGACATCACTTGGACTGGGGCAGTTTGTGAGAATTTTTCAGGGTAAAGGTCTAAGCAAGTATCAGCTGGTAAATCTAACCATGAAAAAACTCAAGGATATGGGTGCCAATGCAGTAGGACCTCGTAGGAAACTGATTCATGCCATGGACTGTGTTTGTCAGCCATATTGCTTTGAGACGTTGTAA 783 0.4278 MVKTKQKRTGKVPGKKSGTSSHDLVDSRNFDNQHEDSDWVIVKKQRVTILVPAAPLKERSANQGPNHTQLMPPELASNHVRLPIETSTIHPSGNEHEKTTLLTGQKETRTERRAPPILPKPTVVNPPSVDQRTESDNPRQMNSLKSHKQHGISDTSKVIKQPRILLPPRRPSNLETLNKNLRASNLERKLERAGGLSKWLTSLGLGQFVRIFQGKGLSKYQLVNLTMKKLKDMGANAVGPRRKLIHAMDCVCQPYCFETL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02620 260 PANTHER SCP160 128 257 - -
Spst1g02620 260 SMART SAM_4 188 254 IPR001660 GO:0005515
Spst1g02620 260 Pfam SAM domain (Sterile alpha motif) 196 250 IPR001660 GO:0005515
Spst1g02620 260 MobiDBLite consensus disorder prediction 1 36 - -
Spst1g02620 260 SUPERFAMILY SAM/Pointed domain 194 253 IPR013761 -
Spst1g02620 260 Gene3D - 185 253 IPR013761 -
Spst1g02620 260 CDD SAM_superfamily 196 247 - -
Spst1g02620 260 MobiDBLite consensus disorder prediction 87 159 - -
Spst1g02620 260 MobiDBLite consensus disorder prediction 126 149 - -
Spst1g02620 260 ProSiteProfiles SAM domain profile. 196 254 IPR001660 GO:0005515
Spst1g02620 260 MobiDBLite consensus disorder prediction 100 114 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02620 - - gmx:100804141 440.654