Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02615 ATGATGCCTAAACCCATGAACGTTCTGACAACAAAGCCCTCACCTTTGAGCACCATGGTGATGGTGCTGATCCTCTGCATTCTGGGTTTCTACGCTCTGCATTTCCCTCACTCTTCAACACGTTCCTCCTCCTCCCAAAACCTCTCTCACGTGGATACCCTTTTTCTCTCTACTTCCTCAAATTTCACTATTTCCTCCTACCTCCGCGCCCTCACCGTGCACCCTCACCTCGCTGGAACAAAACCCGCCTCTGACACCGCTCGCTACGTTCTCAACCACTTCTCTTCATTGGGTCTTGAGGCCCACACCGCGACCTACACCACCCTCCTCTCCTTCCCGTTGCGTTCCTCCCTCTCGGCACATTTTAGCGACGGCTCCTCGGCGAGCCTCCGACTTACGGAGCCGGCCGCCGCCGGCGTGGTTCCGTCCTACCACGCATACTCGCCGTCGGGTGCAGTGTACGCGCGCGCAGTGTTCGTGAACTACGGGCGGGAGAGGGACTACCGAGCGCTGGGCACGATGGGAGTGAACGTGAGCGGGTGCGTGGTGGTGGTGCGGAAGGGCGGGGCGATTGGGCGCGGCGCGATAGTGGAGAGAGCGGAGGCGCACGGGGCGGCGGCGGTGCTGGTTTACGGCGAGGGCGACACGTGGCGGAAGGGGTTTGAGAGGGGGCACGTGATGAGGGGTGGAATAGGGGACCCACTTACTCCTGGTTGGGCTGGGGTTGAGGGTGGTGAGACATTGGGATTGGAAGATAGTGAGGTTTTGAAAAGGTTCCCCAAAATTCCATCCATGCCCTTGTCAGCCGAAGTGGCTGACACTATTTTGTCGTCTCTTGGGGGTGTTCCTGTGCCCCATGAATGGAGGGGCACCCTAAGGTCTAAGGTCAGGCATGTTGGTCCTGGCCCCACCATTCTCAATTTCACTTACCAGGGTGAAAAGAAAGTGGCCACCATTCAAAATGTTTTTGCTGTCATAAAGGGATCAGAAGAACCTGATCGATATGTATTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTACTCGACATTGCTCGTCGGTTTTCTGTTCTATTGGGCTTGGGGTGGAAGCCAAGGAGGACAATCATTCTCTGCAGTTGGGATGCAGAAGAATTTGGGATGATAGGATCTACTGAATGGGTTGAACAGAACCTTATTAATCTGGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGCGCTGTGCAAGGCCCTGGTTTCTTTGTTGGTTCAACTCCTCAGCTAGACAGTCTTATTCTTGAGGTCACAAAAATGGTCAAGGATCCTGACTCTGAGGGTGTATCACTATATGAGAATTGGGCTGCTGCGGCTGGTGGTGGAAGCAATAATATTCAGAGGCTCAGTGGAGTTGATTCTGATTTTGCTCCATTTGTGCAACACGCAGGGGTTCCATCCATTGATATGTATTATGGAAGAGATTTTCCTGTCTATCATACTGCGTTCGACTCATATAACTGGATGGCAGAGTATGGAGATCCATTCTTCCACCGCCATGTTGCTGTTACTGGAGTTTGGGGGCTTCTAGCCCTTCACTTGGCTGGTGATCCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGTTGTACAAAAACATTTTGAGTAACTTGATAGACCAGAAAATTTCTCTACATCCATTAATTCTTTCGATTGAAGAATTTGCTTCTGCTGCCAAAGAAGCTGATGATGAATTGAAGAAACTGAGATTGCAAGAAACAGAAGGTTGTTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCTGAAAAAGGGTTCTTGGATGGAGATGGACTTCAAGGAAGGCAATGGTTCAAGCATCTCGTGTTTGGGCCTTCAAGCGACCATGAAAAGCTCAATTTTTTCCCCGGGATTTCTGATTCTATTACGAGTTCTGCGGGTGTAACTGAAAGAGAAAGGCTAGCATCAATTCAACATGAGATCTGGAGGGTTGCCAGAGCCATTCGTAGAGCTGCTTCTGCACTCACAGGAGAATTCACCTAA 2094 0.5033 MMPKPMNVLTTKPSPLSTMVMVLILCILGFYALHFPHSSTRSSSSQNLSHVDTLFLSTSSNFTISSYLRALTVHPHLAGTKPASDTARYVLNHFSSLGLEAHTATYTTLLSFPLRSSLSAHFSDGSSASLRLTEPAAAGVVPSYHAYSPSGAVYARAVFVNYGRERDYRALGTMGVNVSGCVVVVRKGGAIGRGAIVERAEAHGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGVEGGETLGLEDSEVLKRFPKIPSMPLSAEVADTILSSLGGVPVPHEWRGTLRSKVRHVGPGPTILNFTYQGEKKVATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSVLLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLILEVTKMVKDPDSEGVSLYENWAAAAGGGSNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYGDPFFHRHVAVTGVWGLLALHLAGDPILPFNYVSYANELQLYKNILSNLIDQKISLHPLILSIEEFASAAKEADDELKKLRLQETEGCFVDMKKRALNDRLMLAEKGFLDGDGLQGRQWFKHLVFGPSSDHEKLNFFPGISDSITSSAGVTERERLASIQHEIWRVARAIRRAASALTGEFT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02615 697 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 545 695 - -
Spst1g02615 697 SUPERFAMILY Transferrin receptor-like dimerisation domain 544 694 IPR036757 -
Spst1g02615 697 Pfam Transferrin receptor-like dimerisation domain 569 692 IPR007365 -
Spst1g02615 697 FunFam Os01g0740650 protein 312 544 - -
Spst1g02615 697 Gene3D - 116 312 - -
Spst1g02615 697 CDD M28_PSMA_like 317 545 - -
Spst1g02615 697 Gene3D - 547 697 IPR036757 -
Spst1g02615 697 SUPERFAMILY PA domain 109 323 IPR046450 -
Spst1g02615 697 Pfam PA domain 155 215 IPR003137 -
Spst1g02615 697 SUPERFAMILY Zn-dependent exopeptidases 66 542 - -
Spst1g02615 697 Coils Coil 578 598 - -
Spst1g02615 697 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 694 IPR039373 -
Spst1g02615 697 Pfam Peptidase family M28 321 510 IPR007484 -
Spst1g02615 697 Gene3D Zn peptidases 64 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02615 Spst-Chr1 34628114 34632995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02615 K01301 - gmx:100798131 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02615 1 34628114 34632995 Spst1g02615 1 34628114 34632995 ECH
Spst1g02615 1 34628114 34632995 Spst7g00205 7 1501364 1507010 PCT